RNA id: TU501219



Basic Information


Item Value
RNA id TU501219
length 242
lncRNA type inter_gene
GC content 0.31
exon number 1
gene id G436664
representative True

Chromosome Information


Item Value
chromosome id CI01000306
NCBI id null
chromosome length 11491657
location 9895042 ~ 9895283 (-)
genome version v1_2015/06_NatureGenetics_grasscarp_Genome
species grasscarp
(Ctenopharyngodon idella)

Sequence


CTTATCTCGCAATTCTGACTTTATTTCTCAATTTTAATTTTCAATCCGGACTTTATATCTTACAAAAAGTCAGAATTGCGAGATAAAAAGTCTTTTTTTAGTCAGTGGATGGCAGAAACAAGCTTCCATACTTTGGCCTACAGCTTTGTTTTATAGTATAATCTTACTCTATTAAATCACATGCTGTATACTTTAACAACTAGCTGTTTTGGTTAAAAACCTATGTTAACCCATTTAATCCC

Function


GO: NA

KEGG: NA

JBrowse2


Neighbor


RNA id RNA type direction distance location representative gene id
TU501189 lncRNA downstream 1834 9892180 ~ 9893208 (-) True G436639
TU501178 lncRNA downstream 40361 9854226 ~ 9854681 (-) True G436631
TU501015 lncRNA downstream 109515 9772188 ~ 9785527 (-) True G436473
TU500987 lncRNA downstream 206635 9679509 ~ 9688407 (-) True G436445
TU501042 lncRNA downstream 246262 9648484 ~ 9648780 (-) True G436500
TU501220 lncRNA upstream 235 9895518 ~ 9895742 (-) True G436665
TU501221 lncRNA upstream 500 9895783 ~ 9896018 (-) True G436666
TU501222 lncRNA upstream 741 9896024 ~ 9896262 (-) True G436667
TU501224 lncRNA upstream 7913 9903196 ~ 9903649 (-) True G436669
TU501223 lncRNA upstream 8663 9903946 ~ 9904572 (-) True G436668
CI01000306_09887420_09890429.mRNA mRNA downstream 4613 9887140 ~ 9890429 (-) True CI01000306_09887420_09890429
CI01000306_09879930_09884435.mRNA mRNA downstream 9772 9878694 ~ 9885270 (-) True CI01000306_09879930_09884435
CI01000306_09825468_09827244.mRNA mRNA downstream 67760 9824575 ~ 9827282 (-) True CI01000306_09825468_09827244
CI01000306_09801952_09806496.mRNA mRNA downstream 86242 9801947 ~ 9808800 (-) True CI01000306_09801952_09806496
CI01000306_09753380_09774568.mRNA mRNA downstream 120258 9752368 ~ 9774784 (-) True CI01000306_09753380_09774568
CI01000306_09944940_09958459.mRNA mRNA upstream 49348 9944631 ~ 9959168 (-) True CI01000306_09944940_09958459
CI01000306_09983479_10008765.mRNA mRNA upstream 87310 9982593 ~ 10009753 (-) True CI01000306_09983479_10008765
CI01000306_10025743_10034143.mRNA mRNA upstream 130410 10025693 ~ 10034143 (-) True CI01000306_10025743_10034143
CI01000306_10262423_10269446.mRNA mRNA upstream 367140 10262423 ~ 10269446 (-) True CI01000306_10262423_10269446
CI01000306_10274565_10279388.mRNA mRNA upstream 378582 10273865 ~ 10279388 (-) True CI01000306_10274565_10279388
TU501173 other downstream 58719 9835025 ~ 9836323 (-) True G436626
TU500988 other downstream 223266 9656279 ~ 9671776 (-) True G436446
TU498677 other downstream 3028106 6866656 ~ 6866936 (-) True G434338
TU498395 other downstream 3442791 6437406 ~ 6452251 (-) True G434086
TU498319 other downstream 3533399 6355180 ~ 6361643 (-) True G434016
TU501193 other upstream 126865 10022148 ~ 10025375 (-) True G436643

Expression Profile