RNA id: TU502293



Basic Information


Item Value
RNA id TU502293
length 254
lncRNA type inter_gene
GC content 0.52
exon number 1
gene id G437625
representative True

Chromosome Information


Item Value
chromosome id CI01000308
NCBI id null
chromosome length 1982671
location 119951 ~ 120204 (-)
genome version v1_2015/06_NatureGenetics_grasscarp_Genome
species grasscarp
(Ctenopharyngodon idella)

Sequence


TGTGGTAATACTGGTGGCTTTTAAAGCAGAGTCAGATGAAGGCAGGTTTATGGAGGATTTCCTCAGGTATAAGCACACAGTTCACACACCACCTGCGTCCTGCTCGAGCCGACAAGTCAAGTCCGACCTTGAGAAAGGGCCTCATTCATGGAGCCAGGGATGTTCTGGTGAAAACTCAAACCACACAGGCCGTTTGAAGTGTGATCCGATGGACTGCACAGCAGCACTCTTGGGCTTAGCACGGCACGCAACTC

Function


GO: NA

KEGG: NA

JBrowse2


Neighbor


RNA id RNA type direction distance location representative gene id
TU502290 lncRNA downstream 5323 114325 ~ 114628 (-) True G437622
TU502288 lncRNA downstream 7779 111828 ~ 112172 (-) True G437620
TU502262 lncRNA downstream 70489 49234 ~ 49462 (-) True G437594
TU502261 lncRNA downstream 70970 48733 ~ 48981 (-) True G437593
TU502295 lncRNA upstream 3815 124019 ~ 125151 (-) True G437627
TU502297 lncRNA upstream 7223 127427 ~ 127921 (-) True G437629
TU502301 lncRNA upstream 11380 131584 ~ 131901 (-) True G437633
TU502307 lncRNA upstream 21049 141253 ~ 141457 (-) True G437639
TU502309 lncRNA upstream 21394 141598 ~ 142913 (-) True G437640
CI01000308_00110535_00111604.mRNA mRNA downstream 8293 109601 ~ 111658 (-) True CI01000308_00110535_00111604
CI01000308_00041387_00048067.mRNA mRNA downstream 71698 41347 ~ 48253 (-) True CI01000308_00041387_00048067
CI01000308_00012346_00036304.mRNA mRNA downstream 83538 11975 ~ 36413 (-) True CI01000308_00012346_00036304
CI01000308_00003475_00004723.mRNA mRNA downstream 115124 3297 ~ 4827 (-) True CI01000308_00003475_00004723
CI01000308_00474123_00482394.mRNA mRNA upstream 353860 474064 ~ 483464 (-) True CI01000308_00474123_00482394
CI01000308_00529728_00530015.mRNA mRNA upstream 409414 529618 ~ 530145 (-) True CI01000308_00529728_00530015
CI01000308_00711286_00720426.mRNA mRNA upstream 591012 711216 ~ 720712 (-) True CI01000308_00711286_00720426
CI01000308_00750618_00755764.mRNA mRNA upstream 629583 749787 ~ 756480 (-) True CI01000308_00750618_00755764
CI01000308_01027964_01028971.mRNA mRNA upstream 905641 1025845 ~ 1028971 (-) True CI01000308_01027964_01028971
TU502303 other upstream 15104 135308 ~ 135685 (-) True G437635
TU503204 other upstream 827352 947556 ~ 953628 (-) False G438434
TU503464 other upstream 1657391 1777595 ~ 1782581 (-) True G438671

Expression Profile