RNA id: TU502367


Basic Information

Item Value
RNA id TU502367
length 264
lncRNA type inter_gene
GC content 0.34
exon number 2
gene id G437685
representative True

Chromosome Information

Item Value
chromosome id CI01000308
NCBI id null
chromosome length 1982671
location 191063 ~ 241415 (-)
genome version v1_2015/06_NatureGenetics_grasscarp_Genome
species grasscarp
(Ctenopharyngodon idella)

Sequence

GTGTTTACAACAGTATCAGTCCTTTCAAAATAAAAGTCTTTGCTACTGACTGACTCACTCAAACAGTCTTTGCCACCATCTGACTTTTCCTAGTCTGTTTTTAGTTGATCTCCATGAGATGACGCATTCTGTTGCTGTTCACGGTCAGGGACTATTTTTTCAAGCGGAAGGAAGGCTTTTAGTGATTTTACTTCATGAAAGTTGCATCGATATATACATATATTTGCTTTAATATTTGTATATATGGAATAATCATTTTATAAA

Function

GO: NA

KEGG: NA

JBrowse2

Neighbor

RNA id RNA type direction distance location representative gene id
TU502309 lncRNA downstream 74358 141598 ~ 142913 (-) True G437640
TU502307 lncRNA downstream 75814 141253 ~ 141457 (-) True G437639
TU502301 lncRNA downstream 85370 131584 ~ 131901 (-) True G437633
TU502297 lncRNA downstream 89350 127427 ~ 127921 (-) True G437629
TU502295 lncRNA downstream 92120 124019 ~ 125151 (-) True G437627
TU503019 lncRNA upstream 249475 490890 ~ 491161 (-) True G438262
TU503043 lncRNA upstream 309446 550861 ~ 551099 (-) True G438286
TU503070 lncRNA upstream 351574 592989 ~ 593241 (-) True G438313
TU503074 lncRNA upstream 376572 617987 ~ 618219 (-) True G438317
TU503059 lncRNA upstream 415668 657083 ~ 669785 (-) True G438302
CI01000308_00110535_00111604.mRNA mRNA downstream 105613 109601 ~ 111658 (-) True CI01000308_00110535_00111604
CI01000308_00041387_00048067.mRNA mRNA downstream 169018 41347 ~ 48253 (-) True CI01000308_00041387_00048067
CI01000308_00012346_00036304.mRNA mRNA downstream 180858 11975 ~ 36413 (-) True CI01000308_00012346_00036304
CI01000308_00003475_00004723.mRNA mRNA downstream 212444 3297 ~ 4827 (-) True CI01000308_00003475_00004723
CI01000308_00474123_00482394.mRNA mRNA upstream 232649 474064 ~ 483464 (-) True CI01000308_00474123_00482394
CI01000308_00529728_00530015.mRNA mRNA upstream 288203 529618 ~ 530145 (-) True CI01000308_00529728_00530015
CI01000308_00711286_00720426.mRNA mRNA upstream 469801 711216 ~ 720712 (-) True CI01000308_00711286_00720426
CI01000308_00750618_00755764.mRNA mRNA upstream 508372 749787 ~ 756480 (-) True CI01000308_00750618_00755764
CI01000308_01027964_01028971.mRNA mRNA upstream 784430 1025845 ~ 1028971 (-) True CI01000308_01027964_01028971
TU502303 other downstream 81586 135308 ~ 135685 (-) True G437635
TU503204 other upstream 706141 947556 ~ 953628 (-) False G438434
TU503464 other upstream 1536180 1777595 ~ 1782581 (-) True G438671

Expression Profile