RNA id: TU502651


Basic Information

Item Value
RNA id TU502651
length 262
lncRNA type inter_gene
GC content 0.37
exon number 1
gene id G437941
representative True

Chromosome Information

Item Value
chromosome id CI01000308
NCBI id null
chromosome length 1982671
location 831892 ~ 832153 (+)
genome version v1_2015/06_NatureGenetics_grasscarp_Genome
species grasscarp
(Ctenopharyngodon idella)

Sequence

ATTGAATTTATGCTTATATTCACATATAAACATTCATCAACTCACACATAGTTGTGGTAAACGGAAGCTCAAGCATGTTTGACACGTGAGAAACCAATGAGGTTCATTCTCGTGTGTTTACGCAGCACGTTTGAGCTTCTGCAAGAGGTTTGTTCTCACGCATCAAGCAGGTTTAGTTGAGCTTCTGTTTATGTTCACTGATCAATGTTTATATGAGAATAAAAGCCTAAATTCAATCTGTTCATCTTATAAAGCAATCGAG

Function

GO: NA

KEGG: NA

JBrowse2

Neighbor

RNA id RNA type direction distance location representative gene id
TU502649 lncRNA upstream 8742 822724 ~ 823150 (+) True G437939
TU502648 lncRNA upstream 9231 822389 ~ 822661 (+) True G437938
TU502626 lncRNA upstream 10289 785964 ~ 821603 (+) False G437917
TU502627 lncRNA upstream 23745 785964 ~ 808147 (+) True G437917
TU502639 lncRNA upstream 35006 796462 ~ 796886 (+) True G437929
TU502559 lncRNA downstream 46286 878439 ~ 893235 (+) True G437853
TU502560 lncRNA downstream 214293 1046446 ~ 1048498 (+) True G437854
TU502663 lncRNA downstream 222462 1054615 ~ 1058043 (+) True G437952
TU502698 lncRNA downstream 253183 1085336 ~ 1087243 (+) True G437985
TU502534 lncRNA downstream 278605 1110758 ~ 1114271 (+) False G437837
CI01000308_00770560_00784179.mRNA mRNA upstream 46096 770272 ~ 785796 (+) True CI01000308_00770560_00784179
CI01000308_00695140_00699646.mRNA mRNA upstream 131991 695140 ~ 699901 (+) True CI01000308_00695140_00699646
CI01000308_00657092_00659557.mRNA mRNA upstream 171404 656991 ~ 660488 (+) True CI01000308_00657092_00659557
CI01000308_00640975_00648455.mRNA mRNA upstream 182751 640908 ~ 649141 (+) True CI01000308_00640975_00648455
CI01000308_00435833_00465809.mRNA mRNA upstream 365846 435553 ~ 466046 (+) True CI01000308_00435833_00465809
CI01000308_00836074_00942387.mRNA mRNA downstream 3921 836074 ~ 942387 (+) True CI01000308_00836074_00942387
CI01000308_00983925_00991307.mRNA mRNA downstream 151772 983925 ~ 991389 (+) True CI01000308_00983925_00991307
CI01000308_01003736_01006059.mRNA mRNA downstream 171583 1003736 ~ 1007117 (+) True CI01000308_01003736_01006059
CI01000308_01132580_01134190.mRNA mRNA downstream 299872 1132025 ~ 1134414 (+) True CI01000308_01132580_01134190
CI01000308_01594565_01626825.mRNA mRNA downstream 762412 1594565 ~ 1626825 (+) True CI01000308_01594565_01626825

Expression Profile