RNA id: CI01000310_01508712_01511125.mRNA



Basic Information


Item Value
RNA id CI01000310_01508712_01511125.mRNA
length 615
RNA type mRNA
GC content 0.52
exon number 2
gene id CI01000310_01508712_01511125
representative False

Chromosome Information


Item Value
chromosome id CI01000310
NCBI id null
chromosome length 5141163
location 1508341 ~ 1513341 (+)
genome version v1_2015/06_NatureGenetics_grasscarp_Genome
species grasscarp
(Ctenopharyngodon idella)

Sequence


ATGGCAATGTCACATGCAGCTAAGCCCTTAAAAAGTTCAGAAAGCCTTTCTGCATCACAGGATGACCACCTTTCCAGTTTGAAGGCTTTGACTGAGAAGCTGAAACTGGAGACCAGCAAGCCGTCTTACCTGGACTGGAGAGCCCAGCTGGAGGCGATGCTGGCCCAGAGCCACAGAGTCTCAGATGCGTTAGCCGCACCGGGTGACACGGAGAAGCAAAAAACATCAGGTCCTCTTAAGTGGACGAAGCCGTCACTGGGCGCTGGTGTGATCCATGAAGGGAGGCAACCATCAGTGAACAGACTGGGATTTGGAAGTATAGACAGAGCGTTGGAGTGGCTCAGGAAAGAGCTGGCAGAGATGCGTTTACAGGACCAGCAGCTCGCACGTCAGCTAATGCACCTGCGCAGTGACATTAACAAACAGAGAATCGTGCAGACGTGTAACCAACATCGCAAGATGCTGAACGATGCCACATTTGAGCTGGAGGAGCGAGACGATATGTCAGATTTATGTGACGTCCCCATGTCTCCTGGATTAGGCCTCTCCTCGACACTCAAGGTCATCGGGGTCACCAAGATGAACATCAACTCTCGGCGGTTTTCCCTGTGCTAA

Function


GO: NA

KEGG: NA

JBrowse2


Neighbor


RNA id RNA type direction distance location representative gene id
TU504671 lncRNA upstream 98107 1407707 ~ 1410605 (+) True G439657
TU504642 lncRNA upstream 141209 1357898 ~ 1367503 (+) True G439628
TU504645 lncRNA upstream 142283 1365631 ~ 1366429 (+) True G439631
TU504569 lncRNA upstream 246951 1261346 ~ 1261761 (+) True G439565
TU504539 lncRNA upstream 310642 1197604 ~ 1198070 (+) True G439541
TU504698 lncRNA downstream 11613 1522738 ~ 1523826 (+) True G439679
TU504725 lncRNA downstream 51196 1562321 ~ 1562554 (+) True G439704
TU504744 lncRNA downstream 92772 1603897 ~ 1604107 (+) True G439721
TU504746 lncRNA downstream 93726 1604851 ~ 1605069 (+) True G439723
TU504764 lncRNA downstream 139887 1651012 ~ 1651387 (+) True G439741
CI01000310_01414325_01452698.mRNA mRNA upstream 56014 1414325 ~ 1452698 (+) True CI01000310_01414325_01452698
CI01000310_01411744_01412226.mRNA mRNA upstream 96245 1411744 ~ 1412467 (+) True CI01000310_01411744_01412226
CI01000310_01394296_01394727.mRNA mRNA upstream 113804 1393089 ~ 1394908 (+) True CI01000310_01394296_01394727
CI01000310_01257447_01269508.mRNA mRNA upstream 238679 1257327 ~ 1270033 (+) True CI01000310_01257447_01269508
CI01000310_01207513_01226750.mRNA mRNA upstream 281540 1207057 ~ 1227172 (+) False CI01000310_01207513_01226750
CI01000310_01513690_01517791.mRNA mRNA downstream 2565 1513690 ~ 1518229 (+) True CI01000310_01513690_01517791
CI01000310_01564875_01571307.mRNA mRNA downstream 53750 1564875 ~ 1572028 (+) True CI01000310_01564875_01571307
CI01000310_01588365_01597469.mRNA mRNA downstream 75367 1586492 ~ 1597486 (+) True CI01000310_01588365_01597469
CI01000310_01638700_01644396.mRNA mRNA downstream 127575 1638700 ~ 1644598 (+) True CI01000310_01638700_01644396
CI01000310_01663192_01666886.mRNA mRNA downstream 152067 1663192 ~ 1667160 (+) True CI01000310_01663192_01666886
TU504536 other upstream 269307 1222006 ~ 1239405 (+) True G439538
TU503984 other upstream 817520 651976 ~ 653337 (+) True G439115
TU503981 other upstream 840660 651976 ~ 653356 (+) False G439115
TU503983 other upstream 840660 651976 ~ 653356 (+) True G439115
TU504002 other upstream 859159 648566 ~ 649553 (+) False CI01000310_00648731_00650082
TU504915 other downstream 400476 1911601 ~ 1912417 (+) True G439845
TU505742 other downstream 1588292 3099417 ~ 3136328 (+) True G440505

Expression Profile