RNA id: TU504915



Basic Information


Item Value
RNA id TU504915
length 817
RNA type TUCP
GC content 0.48
exon number 1
gene id G439845
representative True

Chromosome Information


Item Value
chromosome id CI01000310
NCBI id null
chromosome length 5141163
location 1911601 ~ 1912417 (+)
genome version v1_2015/06_NatureGenetics_grasscarp_Genome
species grasscarp
(Ctenopharyngodon idella)

Sequence


TTTTTGTTCTGTTTTCATGCTCTTCAGTTTCTTAGTTTTCTAGTTTGTAAATTGTTTCAGTTCTCCTCGTGTGCCTGCCTGTTTGTTGTCTTGGTTACAGATTAATTAGTGTCCTCAGTTCAGGTGTGTCTTGTTAATTTAGTCTCGTTAACCCCTTGTTTGCTGTGTATTTAAGTCTTCAGTTTCAGTCCAGTCTTTGTCCTGTATTGTTTAAGTTACATGGTGTTTGTGGTATAATTTCCTGGTGATTTTCCTGTTCCTTGTTCCTAGTGTTCCATTAAATGTTATTAAAGATATCTCCTTCGTTGTGCAATTAATACTGCAATACCAGCCATGACAGAATACAGGACCTCAAACAGAAAATGATGAGCCTCGTTGCAAGATGGTCGTCATCCCAGAGCCTCGTCCCAAGATGGCCACCATCCATGAGCCACGCCTGAGCCCTCGGTCAAGATGGCAGCCGCCACGGCTATGAATCTCTTCCTCGTCCAGGATACAGTCCCTGACCACAGTCCTATGATGGCTCCAGTCCCTGACCTCAGTCCAGTGAGGGTTCCCGTCTTCGTCCTGAGTCCAGAGGCGACTGCCTTCCTCGACCACAGTCCAGTTCCTGTGTTTGCTCCAGTCCCTGAGCCCATTCATAGCCCAGAGGACGTTATAATGTCTATAATGACACTAGCAATTGTGTGTGTTTGGGCCACCCACACAACGGCTCCTGCCCCTGACCAGAGTCCAGTGATGGCTCCTGCCCCTGACCAGAGTCCAGTGATGACTCCTGCCCCTGACCAGAGTCCAGTGATGACTCCTGCCCCTGACC

Function


GO: NA

KEGG: NA

JBrowse2


Neighbor


RNA id RNA type direction distance location representative gene id
TU504917 lncRNA upstream 3569 1907363 ~ 1908032 (+) True G439847
TU504916 lncRNA upstream 5214 1905965 ~ 1906387 (+) True G439846
TU504914 lncRNA upstream 6421 1904769 ~ 1905180 (+) True G439844
TU504913 lncRNA upstream 8037 1899366 ~ 1903564 (+) True G439843
TU504911 lncRNA upstream 13351 1897560 ~ 1898250 (+) True G439841
TU504919 lncRNA downstream 1688 1914105 ~ 1914426 (+) True G439849
TU504920 lncRNA downstream 6051 1918468 ~ 1918808 (+) True G439850
TU504896 lncRNA downstream 44738 1957155 ~ 1959063 (+) True G439826
TU504929 lncRNA downstream 53253 1965670 ~ 1965988 (+) True G439859
TU504855 lncRNA downstream 146353 2062563 ~ 2075101 (+) True G439795
CI01000310_01887698_01893727.mRNA mRNA upstream 17761 1887300 ~ 1893840 (+) True CI01000310_01887698_01893727
CI01000310_01814975_01815586.mRNA mRNA upstream 95945 1814975 ~ 1815656 (+) True CI01000310_01814975_01815586
CI01000310_01737635_01745606.mRNA mRNA upstream 165914 1737635 ~ 1745687 (+) True CI01000310_01737635_01745606
CI01000310_01723036_01723254.mRNA mRNA upstream 188051 1723036 ~ 1723550 (+) True CI01000310_01723036_01723254
CI01000310_01693209_01696414.mRNA mRNA upstream 214730 1692729 ~ 1696871 (+) True CI01000310_01693209_01696414
CI01000310_01941915_01945313.mRNA mRNA downstream 29498 1941915 ~ 1945642 (+) True CI01000310_01941915_01945313
CI01000310_01947567_01956704.mRNA mRNA downstream 35150 1947567 ~ 1956760 (+) True CI01000310_01947567_01956704
CI01000310_01981356_01982015.mRNA mRNA downstream 68558 1980975 ~ 1982224 (+) True CI01000310_01981356_01982015
CI01000310_01992187_02003475.mRNA mRNA downstream 79223 1991640 ~ 2003475 (+) True CI01000310_01992187_02003475
CI01000310_02017340_02026116.mRNA mRNA downstream 104923 2017340 ~ 2026116 (+) True CI01000310_02017340_02026116
TU504694 other upstream 398260 1501886 ~ 1501950 (+) True G439675
TU504536 other upstream 672196 1222006 ~ 1239405 (+) True G439538
TU503984 other upstream 1220409 651976 ~ 653337 (+) True G439115
TU503981 other upstream 1243549 651976 ~ 653356 (+) False G439115
TU503983 other upstream 1243549 651976 ~ 653356 (+) True G439115
TU505742 other downstream 1187000 3099417 ~ 3136328 (+) True G440505

Expression Profile