RNA id: TU519747


Basic Information

Item Value
RNA id TU519747
length 287
lncRNA type inter_gene
GC content 0.28
exon number 1
gene id G452685
representative True

Chromosome Information

Item Value
chromosome id CI01000319
NCBI id null
chromosome length 6428943
location 5512793 ~ 5513079 (+)
genome version v1_2015/06_NatureGenetics_grasscarp_Genome
species grasscarp
(Ctenopharyngodon idella)

Sequence

ATATATCATTACCACACTGGATATAGTGATTTGTGAAAATCTACCAACCATGAAAGTGTGTTTGCATTATTGTTAAAAAATAATTAAATTAATAAATAAATATATCCAATCACATTGGTAGATGTGGCAAAACTTTTCATTTTGTTTAATTGCGGATGCTTCACCAACTTAGCTTATTTCTTGTTTTGCTAACTTATTTCTATTACACACCATTTTCCTGGAAGAGAAAGACATTTTAAACATATTAAATGCAAATTTAGTCCCCTTTTAGGATAATACTAGCATAT

Function

GO: NA

KEGG: NA

JBrowse2

Neighbor

RNA id RNA type direction distance location representative gene id
TU519740 lncRNA upstream 5566 5506528 ~ 5507227 (+) True G452681
TU519593 lncRNA upstream 9570 5499783 ~ 5503223 (+) True G452547
TU519717 lncRNA upstream 53168 5458331 ~ 5459625 (+) True G452658
TU519649 lncRNA upstream 84941 5356088 ~ 5427852 (+) True G452597
TU519580 lncRNA upstream 159770 5343510 ~ 5353023 (+) False G452541
TU519755 lncRNA downstream 12353 5525432 ~ 5525655 (+) True G452693
TU519756 lncRNA downstream 12593 5525672 ~ 5525941 (+) True G452694
TU519757 lncRNA downstream 12926 5526005 ~ 5526215 (+) True G452695
TU519758 lncRNA downstream 14217 5527296 ~ 5527521 (+) True G452696
TU519759 lncRNA downstream 14601 5527680 ~ 5527890 (+) True G452697
CI01000319_05435510_05450379.mRNA mRNA upstream 62161 5435229 ~ 5450632 (+) True CI01000319_05435510_05450379
CI01000319_05112104_05116909.mRNA mRNA upstream 395719 5111633 ~ 5117074 (+) True CI01000319_05112104_05116909
CI01000319_04949418_04952350.mRNA mRNA upstream 560443 4949305 ~ 4952350 (+) True CI01000319_04949418_04952350
CI01000319_04931863_04933044.mRNA mRNA upstream 579707 4931653 ~ 4933086 (+) True CI01000319_04931863_04933044
CI01000319_04907275_04915465.mRNA mRNA upstream 597197 4907006 ~ 4915596 (+) True CI01000319_04907275_04915465
CI01000319_05618356_05625888.mRNA mRNA downstream 105277 5618356 ~ 5626767 (+) True CI01000319_05618356_05625888
CI01000319_05651284_05669061.mRNA mRNA downstream 138035 5651114 ~ 5671460 (+) True CI01000319_05651284_05669061
CI01000319_05684798_05685353.mRNA mRNA downstream 171337 5684416 ~ 5685353 (+) True CI01000319_05684798_05685353
CI01000319_05704764_05712826.mRNA mRNA downstream 191004 5704083 ~ 5713091 (+) False CI01000319_05704764_05712826
CI01000319_05718732_05734284.mRNA mRNA downstream 205253 5718332 ~ 5734843 (+) False CI01000319_05718732_05734284
TU519585 other upstream 141309 5359700 ~ 5371484 (+) True G452543
TU519588 other upstream 156758 5353694 ~ 5356035 (+) True G452545
TU519577 other upstream 165799 5339522 ~ 5346994 (+) False G452541
TU519378 other upstream 722264 4787040 ~ 4790529 (+) True CI01000319_04787066_04788609
TU519272 other upstream 976768 4531619 ~ 4533094 (+) True G452260
TU519805 other downstream 195083 5720311 ~ 5732936 (+) False CI01000319_05718732_05734284
TU519967 other downstream 609565 6122644 ~ 6124939 (+) True G452884

Expression Profile