Gene
RNA
| Item | Value |
|---|---|
| RNA id | CI01000321_00441382_00448773.mRNA |
| length | 590 |
| RNA type | mRNA |
| GC content | 0.48 |
| exon number | 7 |
| gene id | CI01000321_00441382_00448773 |
| representative | True |
| Item | Value |
|---|---|
| chromosome id | CI01000321 |
| NCBI id | null |
| chromosome length | 5206101 |
| location | 441382 ~ 448780 (+) |
| genome version | v1_2015/06_NatureGenetics_grasscarp_Genome |
| species | grasscarp (Ctenopharyngodon idella) |
| id | name | namespace |
|---|---|---|
| GO:0000184 | nuclear-transcribed mRNA catabolic process, nonsense-mediated decay | biological_process |
| id | description |
|---|---|
| K02964 | RP-S18e, RPS18; small subunit ribosomal protein S18e |
| RNA id | RNA type | direction | distance | location | representative | gene id |
|---|---|---|---|---|---|---|
| TU524337 | lncRNA | upstream | 37617 | 403372 ~ 403765 (+) | True | G456775 |
| TU524344 | lncRNA | upstream | 45078 | 396042 ~ 396304 (+) | True | G456782 |
| TU524342 | lncRNA | upstream | 48966 | 392192 ~ 392416 (+) | True | G456780 |
| TU524325 | lncRNA | upstream | 102881 | 338275 ~ 338501 (+) | True | G456763 |
| TU524322 | lncRNA | upstream | 106389 | 334783 ~ 334993 (+) | True | G456760 |
| TU524353 | lncRNA | downstream | 36776 | 485556 ~ 485862 (+) | True | G456791 |
| TU524355 | lncRNA | downstream | 38023 | 486803 ~ 487488 (+) | True | G456793 |
| TU524357 | lncRNA | downstream | 39177 | 487957 ~ 488309 (+) | True | G456795 |
| TU524360 | lncRNA | downstream | 44560 | 493340 ~ 493807 (+) | True | G456798 |
| TU524362 | lncRNA | downstream | 46455 | 495235 ~ 495481 (+) | True | G456800 |
| CI01000321_00326486_00355049.mRNA | mRNA | upstream | 86180 | 326393 ~ 355202 (+) | True | CI01000321_00326486_00355049 |
| CI01000321_00283589_00284224.mRNA | mRNA | upstream | 157045 | 283324 ~ 284337 (+) | True | CI01000321_00283589_00284224 |
| CI01000321_00150756_00152124.mRNA | mRNA | upstream | 289193 | 150756 ~ 152189 (+) | True | CI01000321_00150756_00152124 |
| CI01000321_00098493_00100489.mRNA | mRNA | upstream | 340796 | 98296 ~ 100586 (+) | True | CI01000321_00098493_00100489 |
| CI01000321_00511077_00516356.mRNA | mRNA | downstream | 61774 | 510554 ~ 516356 (+) | True | CI01000321_00511077_00516356 |
| CI01000321_00549095_00550611.mRNA | mRNA | downstream | 100315 | 549095 ~ 550648 (+) | True | CI01000321_00549095_00550611 |
| CI01000321_00559268_00567811.mRNA | mRNA | downstream | 110488 | 559268 ~ 568138 (+) | True | CI01000321_00559268_00567811 |
| CI01000321_00649226_00658653.mRNA | mRNA | downstream | 200446 | 649226 ~ 658950 (+) | True | CI01000321_00649226_00658653 |
| CI01000321_00697882_00700283.mRNA | mRNA | downstream | 248286 | 697066 ~ 700313 (+) | True | CI01000321_00697882_00700283 |
| TU524336 | other | upstream | 14357 | 426083 ~ 427025 (+) | True | G456774 |
| TU524456 | other | downstream | 369684 | 818464 ~ 822847 (+) | True | G456881 |
| TU525588 | other | downstream | 3340538 | 3789318 ~ 3789972 (+) | True | G457857 |
| TU527032 | other | downstream | 3557846 | 4006626 ~ 4009532 (+) | False | G459103 |
| TU527033 | other | downstream | 3557883 | 4006663 ~ 4009532 (+) | True | G459103 |
| TU527265 | other | downstream | 4036617 | 4485397 ~ 4488552 (+) | True | G459303 |
