Gene
RNA
| Item | Value |
|---|---|
| RNA id | CI01000321_01741333_01755566.mRNA |
| length | 3151 |
| RNA type | mRNA |
| GC content | 0.47 |
| exon number | 17 |
| gene id | CI01000321_01741333_01755566 |
| representative | True |
| Item | Value |
|---|---|
| chromosome id | CI01000321 |
| NCBI id | null |
| chromosome length | 5206101 |
| location | 1741221 ~ 1756358 (+) |
| genome version | v1_2015/06_NatureGenetics_grasscarp_Genome |
| species | grasscarp (Ctenopharyngodon idella) |
| id | name | namespace |
|---|---|---|
| GO:0006355 | regulation of transcription, DNA-templated | biological_process |
| id | description |
|---|---|
| K06062 | PCAF, KAT2, GCN5; histone acetyltransferase |
| RNA id | RNA type | direction | distance | location | representative | gene id |
|---|---|---|---|---|---|---|
| TU524782 | lncRNA | upstream | 121891 | 1618903 ~ 1619330 (+) | True | G457160 |
| TU524717 | lncRNA | upstream | 254587 | 1485125 ~ 1486634 (+) | True | G457100 |
| TU524759 | lncRNA | upstream | 271677 | 1469343 ~ 1469544 (+) | True | G457139 |
| TU524753 | lncRNA | upstream | 287938 | 1451277 ~ 1453283 (+) | True | G457133 |
| TU524740 | lncRNA | upstream | 309800 | 1430229 ~ 1431421 (+) | True | G457121 |
| TU524807 | lncRNA | downstream | 55059 | 1811417 ~ 1811668 (+) | True | G457183 |
| TU524815 | lncRNA | downstream | 64783 | 1821141 ~ 1821502 (+) | True | G457191 |
| TU524872 | lncRNA | downstream | 170817 | 1927175 ~ 1927611 (+) | True | G457245 |
| TU524880 | lncRNA | downstream | 177374 | 1933732 ~ 1933968 (+) | True | G457253 |
| TU524882 | lncRNA | downstream | 185560 | 1941918 ~ 1942125 (+) | True | G457255 |
| CI01000321_01734972_01738515.mRNA | mRNA | upstream | 2702 | 1734598 ~ 1738519 (+) | True | CI01000321_01734972_01738515 |
| CI01000321_01652980_01708876.mRNA | mRNA | upstream | 31668 | 1652980 ~ 1709553 (+) | True | CI01000321_01652980_01708876 |
| CI01000321_01540466_01544669.mRNA | mRNA | upstream | 196202 | 1540466 ~ 1545019 (+) | True | CI01000321_01540466_01544669 |
| CI01000321_01491101_01521160.mRNA | mRNA | upstream | 219800 | 1490893 ~ 1521421 (+) | True | CI01000321_01491101_01521160 |
| CI01000321_01480684_01483493.mRNA | mRNA | upstream | 257429 | 1480684 ~ 1483792 (+) | True | CI01000321_01480684_01483493 |
| CI01000321_01767234_01768560.mRNA | mRNA | downstream | 10876 | 1767234 ~ 1768767 (+) | True | CI01000321_01767234_01768560 |
| CI01000321_01773447_01776531.mRNA | mRNA | downstream | 16714 | 1773072 ~ 1776544 (+) | True | CI01000321_01773447_01776531 |
| CI01000321_01778626_01782120.mRNA | mRNA | downstream | 22268 | 1778626 ~ 1782335 (+) | True | CI01000321_01778626_01782120 |
| CI01000321_01789650_01796167.mRNA | mRNA | downstream | 32946 | 1789304 ~ 1796517 (+) | True | CI01000321_01789650_01796167 |
| CI01000321_02060877_02067096.mRNA | mRNA | downstream | 304519 | 2060877 ~ 2067521 (+) | True | CI01000321_02060877_02067096 |
| TU524456 | other | upstream | 918374 | 818464 ~ 822847 (+) | True | G456881 |
| TU524336 | other | upstream | 1314196 | 426083 ~ 427025 (+) | True | G456774 |
| TU525588 | other | downstream | 2032960 | 3789318 ~ 3789972 (+) | True | G457857 |
| TU527032 | other | downstream | 2250268 | 4006626 ~ 4009532 (+) | False | G459103 |
| TU527033 | other | downstream | 2250305 | 4006663 ~ 4009532 (+) | True | G459103 |
| TU527265 | other | downstream | 2729039 | 4485397 ~ 4488552 (+) | True | G459303 |
| TU527165 | other | downstream | 2759176 | 4515534 ~ 4518187 (+) | True | CI01000321_04515562_04517953 |
| species | RNA id | representative | length | rna type | GC content | exon number | chromosome id | location |
|---|---|---|---|---|---|---|---|---|
| zebrafish (Danio rerio) | TCONS_00027986 | True | 5267 | mRNA | 0.40 | 18 | NC_007130.7 | 20724347 ~ 20755146 (+) |
| bowfin (Amia calva) | AMCG00021678 | True | 4114 | mRNA | 0.44 | 23 | CM030130.1 | 24987477 ~ 25007730 (+) |
