RNA id: TU524079


Basic Information

Item Value
RNA id TU524079
length 232
lncRNA type inter_gene
GC content 0.55
exon number 1
gene id G456537
representative True

Chromosome Information

Item Value
chromosome id CI01000321
NCBI id null
chromosome length 5206101
location 60864 ~ 61095 (+)
genome version v1_2015/06_NatureGenetics_grasscarp_Genome
species grasscarp
(Ctenopharyngodon idella)

Sequence

GTCTTGTTAGTTGAGCCCTATTGGCCCAACCGGACCTGGTTCCCAGAACTCATGCTCCTTGTGACAGCCCTTCCTTGGCGCATGCCAGAAGGACCTTCCTTCTCAGAGACGGGGAACCCTTTGACACCGGCGTCCTGACCTCTGGAAACTCCATGTCTAGTCCCTGGAAAGGACGCAGAGGTTCTAGGTGACTTACCCCCTGAGGTACTTAACACCATCACTTCGGCATGAG

Function

GO: NA

KEGG: NA

JBrowse2

Neighbor

RNA id RNA type direction distance location representative gene id
TU524067 lncRNA upstream 25248 34125 ~ 35616 (+) True G456525
TU524056 lncRNA upstream 36376 24277 ~ 24488 (+) True G456514
TU524046 lncRNA upstream 46489 13869 ~ 14375 (+) True G456508
TU524081 lncRNA downstream 1263 62358 ~ 62561 (+) True G456539
TU524050 lncRNA downstream 24663 85758 ~ 90935 (+) True G456509
TU524052 lncRNA downstream 44858 105953 ~ 125908 (+) True G456510
TU524115 lncRNA downstream 74420 135515 ~ 135725 (+) True G456573
TU524125 lncRNA downstream 115288 176383 ~ 176794 (+) True G456582
CI01000321_00098493_00100489.mRNA mRNA downstream 37201 98296 ~ 100586 (+) True CI01000321_00098493_00100489
CI01000321_00150756_00152124.mRNA mRNA downstream 89661 150756 ~ 152189 (+) True CI01000321_00150756_00152124
CI01000321_00283589_00284224.mRNA mRNA downstream 222229 283324 ~ 284337 (+) True CI01000321_00283589_00284224
CI01000321_00326486_00355049.mRNA mRNA downstream 265298 326393 ~ 355202 (+) True CI01000321_00326486_00355049
CI01000321_00441382_00448773.mRNA mRNA downstream 380287 441382 ~ 448780 (+) True CI01000321_00441382_00448773
TU524336 other downstream 364988 426083 ~ 427025 (+) True G456774
TU524456 other downstream 757369 818464 ~ 822847 (+) True G456881
TU525588 other downstream 3728223 3789318 ~ 3789972 (+) True G457857
TU527032 other downstream 3945531 4006626 ~ 4009532 (+) False G459103
TU527033 other downstream 3945568 4006663 ~ 4009532 (+) True G459103

Expression Profile