RNA id: TU524081


Basic Information

Item Value
RNA id TU524081
length 204
lncRNA type inter_gene
GC content 0.31
exon number 1
gene id G456539
representative True

Chromosome Information

Item Value
chromosome id CI01000321
NCBI id null
chromosome length 5206101
location 62358 ~ 62561 (+)
genome version v1_2015/06_NatureGenetics_grasscarp_Genome
species grasscarp
(Ctenopharyngodon idella)

Sequence

GTGAATACAGATCTGTGTGTTCGATACATCTGAACTGTTCACTCATTCATACAAAGCCCCAGTGGTGTAAGTAGATTATGTATCCCATATATCAGAAATGGGTTCCAAATATCAGTAAATATAAATATATTTTTCTTGTTTATGTATGTTATTTTTTCTAATGCTATATATTCTGTAAGAAGGTGTAGCAATATTAGCTCAAAG

Function

GO: NA

KEGG: NA

JBrowse2

Neighbor

RNA id RNA type direction distance location representative gene id
TU524079 lncRNA upstream 1263 60864 ~ 61095 (+) True G456537
TU524067 lncRNA upstream 26742 34125 ~ 35616 (+) True G456525
TU524056 lncRNA upstream 37870 24277 ~ 24488 (+) True G456514
TU524046 lncRNA upstream 47983 13869 ~ 14375 (+) True G456508
TU524050 lncRNA downstream 23197 85758 ~ 90935 (+) True G456509
TU524052 lncRNA downstream 43392 105953 ~ 125908 (+) True G456510
TU524115 lncRNA downstream 72954 135515 ~ 135725 (+) True G456573
TU524125 lncRNA downstream 113822 176383 ~ 176794 (+) True G456582
TU524126 lncRNA downstream 115235 177796 ~ 178392 (+) True G456583
CI01000321_00098493_00100489.mRNA mRNA downstream 35735 98296 ~ 100586 (+) True CI01000321_00098493_00100489
CI01000321_00150756_00152124.mRNA mRNA downstream 88195 150756 ~ 152189 (+) True CI01000321_00150756_00152124
CI01000321_00283589_00284224.mRNA mRNA downstream 220763 283324 ~ 284337 (+) True CI01000321_00283589_00284224
CI01000321_00326486_00355049.mRNA mRNA downstream 263832 326393 ~ 355202 (+) True CI01000321_00326486_00355049
CI01000321_00441382_00448773.mRNA mRNA downstream 378821 441382 ~ 448780 (+) True CI01000321_00441382_00448773
TU524336 other downstream 363522 426083 ~ 427025 (+) True G456774
TU524456 other downstream 755903 818464 ~ 822847 (+) True G456881
TU525588 other downstream 3726757 3789318 ~ 3789972 (+) True G457857
TU527032 other downstream 3944065 4006626 ~ 4009532 (+) False G459103
TU527033 other downstream 3944102 4006663 ~ 4009532 (+) True G459103

Expression Profile