RNA id: TU527806


Basic Information

Item Value
RNA id TU527806
length 641
lncRNA type inter_gene
GC content 0.40
exon number 1
gene id G459785
representative True

Chromosome Information

Item Value
chromosome id CI01000321
NCBI id null
chromosome length 5206101
location 5012672 ~ 5013312 (+)
genome version v1_2015/06_NatureGenetics_grasscarp_Genome
species grasscarp
(Ctenopharyngodon idella)

Sequence

ATTTTATATTTATCATTTTTATATCCTTCTTCCTAACTTGATTAGTGAAAAGGTCCCCTAAACTTAATTTGATAAGTGATATACAGATCAATTTGTAATCTCCCTCTAAGATCTTTAACAAATGTACAGTCTTTTTTTTTTTTCAAGAGACCTGTGTCAGTACAGAGAGACAGCTTGAGCGGTAAACATCTTGGATTATTAGTCATTTGACGCAGCTGTTTAATTGAGGTGGGACCGAGGGCTTCTCTGCAGTGAAAGACTGCGAGAGCTGCACAACAAATCAAAATGTGTCATAGAAGCCGATCGGTCTCGCCGGGAACTATGGGGGAGATTCGAGTGATGATGACAACTTATGAAAAACACGGTCTGAATAATGATAAAATGAACCGAGAGGGCAAAAAATAGTATGGAGATGTAGAAAAGAGGATAATAAGACTCAAAAATGGAAAGCAGAAAGAGAAAGCGAAGGGGAAAAAGAGAAAGAATAGGCGCCTTGCAGGGCAGGAAATGCTGGCAGAGAAAAGCAGGAGGGGAGGTGGAGAGAGAAAAAGGGGAGATTGGGAATCATAAAAAGAGGAAAGCGCATTTATAAACACGTCTCTATAGTAACCAACTGGTAATTTGGCTGGTGGGAGAGGGAG

Function

GO: NA

KEGG: NA

JBrowse2

Neighbor

RNA id RNA type direction distance location representative gene id
TU527694 lncRNA upstream 164516 4847947 ~ 4848156 (+) True G459683
TU527693 lncRNA upstream 166089 4846356 ~ 4846583 (+) True G459682
TU527289 lncRNA upstream 245392 4693614 ~ 4767280 (+) False G459323
TU527815 lncRNA downstream 5598 5018910 ~ 5025813 (+) True G459792
TU527838 lncRNA downstream 22035 5035347 ~ 5035939 (+) True G459812
TU527841 lncRNA downstream 23701 5037013 ~ 5037467 (+) True G459815
TU527844 lncRNA downstream 27647 5040959 ~ 5041256 (+) True G459818
TU527845 lncRNA downstream 29236 5042548 ~ 5042773 (+) True G459819
CI01000321_05000584_05005208.mRNA mRNA upstream 7293 5000584 ~ 5005379 (+) True CI01000321_05000584_05005208
CI01000321_04859626_04859952.mRNA mRNA upstream 151756 4858995 ~ 4860916 (+) True CI01000321_04859626_04859952
CI01000321_04774523_04814193.mRNA mRNA upstream 198433 4773839 ~ 4814239 (+) True CI01000321_04774523_04814193
CI01000321_04748037_04748315.mRNA mRNA upstream 264354 4747650 ~ 4748318 (+) False CI01000321_04748037_04748315
CI01000321_04716387_04724423.mRNA mRNA upstream 287906 4716387 ~ 4724766 (+) True CI01000321_04716387_04724423
CI01000321_05126875_05128453.mRNA mRNA downstream 113081 5126393 ~ 5129935 (+) True CI01000321_05126875_05128453
TU527167 other upstream 263093 4747412 ~ 4747464 (+) True G459223
TU527165 other upstream 494485 4515534 ~ 4518187 (+) True CI01000321_04515562_04517953
TU527265 other upstream 524120 4485397 ~ 4488552 (+) True G459303
TU527032 other upstream 999006 4006626 ~ 4009532 (+) False G459103

Expression Profile