Item | Value |
---|---|
RNA id | TU548088 |
length | 207 |
lncRNA type | inter_gene |
GC content | 0.37 |
exon number | 1 |
gene id | G477636 |
representative | True |
Item | Value |
---|---|
chromosome id | CI01000335 |
NCBI id | null |
chromosome length | 1176510 |
location | 818147 ~ 818353 (+) |
genome version | v1_2015/06_NatureGenetics_grasscarp_Genome |
species | grasscarp (Ctenopharyngodon idella) |
RNA id | RNA type | direction | distance | location | representative | gene id |
---|---|---|---|---|---|---|
TU548056 | lncRNA | upstream | 15075 | 717098 ~ 803072 (+) | True | G477605 |
TU547942 | lncRNA | upstream | 190857 | 624798 ~ 627290 (+) | True | G477497 |
TU548040 | lncRNA | upstream | 194933 | 622740 ~ 623214 (+) | True | G477589 |
TU548039 | lncRNA | upstream | 195984 | 621964 ~ 622163 (+) | True | G477588 |
TU547950 | lncRNA | upstream | 205763 | 555248 ~ 612384 (+) | True | G477505 |
TU548103 | lncRNA | downstream | 42150 | 860503 ~ 860797 (+) | True | G477651 |
TU547956 | lncRNA | downstream | 45340 | 863693 ~ 881031 (+) | True | G477511 |
TU548115 | lncRNA | downstream | 72496 | 890849 ~ 891075 (+) | True | G477660 |
TU548123 | lncRNA | downstream | 85570 | 903923 ~ 904142 (+) | True | G477668 |
TU548124 | lncRNA | downstream | 85875 | 904228 ~ 904453 (+) | True | G477669 |
CI01000335_00681430_00741137.mRNA | mRNA | upstream | 76925 | 681430 ~ 741222 (+) | True | CI01000335_00681430_00741137 |
CI01000335_00586957_00597421.mRNA | mRNA | upstream | 220039 | 586957 ~ 598108 (+) | True | CI01000335_00586957_00597421 |
CI01000335_00526951_00528066.mRNA | mRNA | upstream | 288489 | 526951 ~ 529658 (+) | False | CI01000335_00526951_00528066 |
CI01000335_00489106_00492720.mRNA | mRNA | upstream | 325174 | 488688 ~ 492973 (+) | True | CI01000335_00489106_00492720 |
CI01000335_00286459_00296460.mRNA | mRNA | upstream | 520891 | 284727 ~ 297256 (+) | True | CI01000335_00286459_00296460 |
CI01000335_00884515_00888701.mRNA | mRNA | downstream | 65985 | 884338 ~ 888831 (+) | True | CI01000335_00884515_00888701 |
CI01000335_00930276_00934328.mRNA | mRNA | downstream | 111923 | 930276 ~ 936380 (+) | True | CI01000335_00930276_00934328 |
CI01000335_00988268_00990978.mRNA | mRNA | downstream | 169915 | 988268 ~ 991337 (+) | True | CI01000335_00988268_00990978 |
CI01000335_01029328_01043603.mRNA | mRNA | downstream | 210975 | 1029328 ~ 1043603 (+) | True | CI01000335_01029328_01043603 |
CI01000335_01055918_01061590.mRNA | mRNA | downstream | 237565 | 1055918 ~ 1061716 (+) | True | CI01000335_01055918_01061590 |
TU547947 | other | upstream | 263514 | 549522 ~ 554633 (+) | True | G477502 |