Gene
RNA
| Item | Value |
|---|---|
| RNA id | TU554912 |
| length | 5851 |
| lncRNA type | inter_gene |
| GC content | 0.35 |
| exon number | 3 |
| gene id | G483614 |
| representative | True |
| Item | Value |
|---|---|
| chromosome id | CI01000339 |
| NCBI id | null |
| chromosome length | 8057057 |
| location | 4904837 ~ 4910813 (-) |
| genome version | v1_2015/06_NatureGenetics_grasscarp_Genome |
| species | grasscarp (Ctenopharyngodon idella) |
| RNA id | RNA type | direction | distance | location | representative | gene id |
|---|---|---|---|---|---|---|
| TU554758 | lncRNA | downstream | 23094 | 4880528 ~ 4881743 (-) | True | G483480 |
| TU554908 | lncRNA | downstream | 25282 | 4879340 ~ 4879555 (-) | True | G483610 |
| TU554907 | lncRNA | downstream | 25586 | 4878706 ~ 4879251 (-) | True | G483609 |
| TU554781 | lncRNA | downstream | 70773 | 4827554 ~ 4834064 (-) | True | G483493 |
| TU554870 | lncRNA | downstream | 116948 | 4787689 ~ 4787889 (-) | True | G483576 |
| TU555837 | lncRNA | upstream | 266340 | 5177153 ~ 5177568 (-) | True | G484405 |
| TU555834 | lncRNA | upstream | 284180 | 5194993 ~ 5195332 (-) | True | G484402 |
| TU555831 | lncRNA | upstream | 345158 | 5255971 ~ 5256317 (-) | False | CI01000339_05254264_05259467 |
| TU555872 | lncRNA | upstream | 450103 | 5360916 ~ 5361196 (-) | False | G484436 |
| TU555874 | lncRNA | upstream | 450103 | 5360916 ~ 5361470 (-) | False | G484436 |
| CI01000339_04889425_04898489.mRNA | mRNA | downstream | 6348 | 4889200 ~ 4898489 (-) | True | CI01000339_04889425_04898489 |
| CI01000339_04841245_04848286.mRNA | mRNA | downstream | 56551 | 4840259 ~ 4848286 (-) | True | CI01000339_04841245_04848286 |
| CI01000339_04773830_04777717.mRNA | mRNA | downstream | 126815 | 4772981 ~ 4778022 (-) | True | CI01000339_04773830_04777717 |
| CI01000339_04742986_04767624.mRNA | mRNA | downstream | 134543 | 4742828 ~ 4770294 (-) | True | CI01000339_04742986_04767624 |
| CI01000339_04739732_04740796.mRNA | mRNA | downstream | 163853 | 4739575 ~ 4740984 (-) | True | CI01000339_04739732_04740796 |
| CI01000339_04915744_04930094.mRNA | mRNA | upstream | 4931 | 4915744 ~ 4930094 (-) | True | CI01000339_04915744_04930094 |
| CI01000339_04955181_04994715.mRNA | mRNA | upstream | 44052 | 4954865 ~ 4994835 (-) | True | CI01000339_04955181_04994715 |
| CI01000339_05009812_05012651.mRNA | mRNA | upstream | 98955 | 5009768 ~ 5014163 (-) | True | CI01000339_05009812_05012651 |
| CI01000339_05022538_05028211.mRNA | mRNA | upstream | 111725 | 5022538 ~ 5028211 (-) | True | CI01000339_05022538_05028211 |
| CI01000339_05038610_05044559.mRNA | mRNA | upstream | 127478 | 5038291 ~ 5044559 (-) | True | CI01000339_05038610_05044559 |
| TU554760 | other | downstream | 51390 | 4851757 ~ 4853447 (-) | True | G483481 |
| TU554803 | other | downstream | 286112 | 4618112 ~ 4618725 (-) | True | G483512 |
| TU554799 | other | downstream | 291519 | 4612852 ~ 4613318 (-) | True | G483509 |
| TU554535 | other | downstream | 734335 | 4125258 ~ 4170502 (-) | True | G483285 |
| TU554443 | other | downstream | 1126286 | 3777891 ~ 3778551 (-) | True | G483199 |
| TU555826 | other | upstream | 345754 | 5274086 ~ 5274270 (-) | True | G484394 |
| TU556180 | other | upstream | 1112919 | 6023732 ~ 6024822 (-) | True | G484702 |
| TU556119 | other | upstream | 1343518 | 6254331 ~ 6256112 (-) | True | G484645 |
| TU556319 | other | upstream | 2090080 | 7000893 ~ 7004773 (-) | True | G484826 |
| species | RNA id | representative | length | rna type | GC content | exon number | chromosome id | location |
|---|---|---|---|---|---|---|---|---|
| striped catfish (Pangasianodon hypophthalmus) | TU152447 | True | 681 | lncRNA | 0.46 | 1 | NC_047602.1 | 7816467 ~ 7817147 (-) |
