RNA id: CI01000340_01916883_01917263.mRNA



Basic Information


Item Value
RNA id CI01000340_01916883_01917263.mRNA
length 1700
RNA type mRNA
GC content 0.52
exon number 1
gene id CI01000340_01916883_01917263
representative True

Chromosome Information


Item Value
chromosome id CI01000340
NCBI id null
chromosome length 19571558
location 1915653 ~ 1917352 (-)
genome version v1_2015/06_NatureGenetics_grasscarp_Genome
species grasscarp
(Ctenopharyngodon idella)

Sequence


ATTCTCATTGATATTACAGTAGTTTGCTTTATCCTTGCTGTTTTTTCTTGCTTTTTTTGTATTTTGGTTCTTTTGTACGGACCAAAAATATGGATCTAGCAGCAGTCCCTTCACCTGTCACCCCTGAAGACCTTCTCCTCTCCCTTGCACAAGATGGTCATCCCCTGATAGACTACTTTGAGGAGTTCCTCGAGCTCAGCTACCTGGTGTCCTGGAGCAACGGCACCTTGAAGACCTGGAGTGGGCTGGATGACTATCTTTTCCAACTGCTGCCAGTGGGAGCTACCACCGGCACGGTGGCCTCAGTACATGGACTATGCTCTTTGGCTCAGTGGCTCACCATTCACAGTTGGCGAGATGGAAGAGGAGGACATCGCCATGCAGCCACAGCCTGCCCAGCCCACTTCTGTCATCCTGTCACCACCCACCCTCGCTCCAGTGACCTCACCTGCCTCGGAACTTCTCCCTAGTCCTTCCCCTCTCCTCTACATGTCTGCCACGAACCCAGAGCAAGTGCCAAAGCCCGCCATGGACGAAATGCCTAAGCCCACTGCAGGCAAGATCCAGAGCCTGCCGCAACGCCTACATCAGAGCTGACACCGGAGCCCGAGCCCAGCAATAAGTCTGACCAGGTGCGAGAGCCGGCAACATCGTTCATTCCAGTAGCCATACTCGTGGAGTACGAGGGCATGGAGGAAAGCCCCACCTACACTCCCGCTGCTGAGGGTGAGCTGTACCTGGCCTCTGTGAATGATTATGAAGTAAAAGAGTTTATTGTGGTCTCCTGTGGTCTCCCGTCTCCGCTGGTCCGTCCCAGCTCCAAGTCTTCGGCGTCTCCGATGGTCCCACCCAGCTCCAAACCAGTCTTCTGGCCCTGCCTCCACTGGTTTCCTTGATGTCCTTGGATCCACCTTGGCTAATGGATCCACTGGCTCTGCCTCTGGCCACTAAGGCCGTCACTCCACCTCGGCCGGTCAACCAGTCGGCCCCACCTTGGCTCCTCCCTCCCTCAGCTCCACCTGGGACCATCATCCTTACGACTCCACCGGGCTCCCTCGTCCCTCTGGCTCCACCTTGGTCAGTCGTCACTCTGCCAACGCCAAGGACTTCTGGGCCTTCAGCTACGCCTCATCTCCTCAATGCCGCTCAAACCATGACTCTCCTTGGCTCCACCTGGGTCTCCTCCTCTCTAGGCTCCACCTCAGTCGGGCAGACTCCTGGCTCCACCCTTGATCCTCCATCCATCGGTTCCACTGTGGGCCTTCATCTTGGCACTGCTCTGTTTCAGTGCCAGGTTCCTCCCTCCATTGTCCCCTCCCTGGCTTCTCTCTCTGTCGACTACCCCATGGACTTTTCTTCAAACTGAGTTATTTTGTGCGTGTTAGCCCCACCTCGCACCACTAAAGTGTAGTTTGTTTACGGCTCAAGGGCACACCTTCCGGGAAAGAGGAGTAATGTCAGGTTTATGTTCTGTTTTCATGAACTTTTGGTTTGTTTCACCTTGTTTTACTGTGTTCTGTTCTTTTTCATTTGTTCCCCACTTTCCCACTCTTCATTTGTTTCCATGGATACTGATTTAGTTGTACACATGTTTCTAGTCTGCTTAGTTGCCTTTTGCTTTATCCTTGTTGTTCTTCTGTTTTTCTTGCGTGCTTTGTATTTTGATTCTTTTGTAAATATAACTGCTAAATATAAATAAA

Function


GO: NA

KEGG: NA

JBrowse2


Neighbor


RNA id RNA type direction distance location representative gene id
TU559793 lncRNA downstream 84630 1830802 ~ 1831023 (-) True G487905
TU559766 lncRNA downstream 169154 1746237 ~ 1746499 (-) True G487881
TU559763 lncRNA downstream 183373 1732043 ~ 1732280 (-) True G487878
TU559757 lncRNA downstream 233257 1681360 ~ 1682396 (-) True G487872
TU558128 lncRNA downstream 358143 1557273 ~ 1557510 (-) True G486406
TU559807 lncRNA upstream 6926 1924278 ~ 1925429 (-) True G487918
TU559818 lncRNA upstream 23975 1941327 ~ 1941535 (-) True G487929
TU559833 lncRNA upstream 57010 1974362 ~ 1974874 (-) True G487942
TU559871 lncRNA upstream 73222 1990574 ~ 1992638 (-) True G487971
TU560000 lncRNA upstream 248640 2165992 ~ 2166240 (-) True G488096
CI01000340_01894781_01909824.mRNA mRNA downstream 4294 1894674 ~ 1911359 (-) True CI01000340_01894781_01909824
CI01000340_01839512_01846883.mRNA mRNA downstream 68760 1838277 ~ 1846893 (-) True CI01000340_01839512_01846883
CI01000340_01785945_01793672.mRNA mRNA downstream 121699 1785827 ~ 1793954 (-) True CI01000340_01785945_01793672
CI01000340_01620065_01624298.mRNA mRNA downstream 290927 1619261 ~ 1624726 (-) True CI01000340_01620065_01624298
CI01000340_01610308_01614177.mRNA mRNA downstream 300742 1610230 ~ 1614911 (-) True CI01000340_01610308_01614177
CI01000340_01952181_01975472.mRNA mRNA upstream 34163 1951515 ~ 1976286 (-) True CI01000340_01952181_01975472
CI01000340_02008099_02012700.mRNA mRNA upstream 90670 2008022 ~ 2012700 (-) True CI01000340_02008099_02012700
CI01000340_02172629_02189732.mRNA mRNA upstream 254331 2171683 ~ 2189732 (-) True CI01000340_02172629_02189732
CI01000340_02293072_02301920.mRNA mRNA upstream 375662 2293014 ~ 2302947 (-) True CI01000340_02293072_02301920
CI01000340_02329631_02332000.mRNA mRNA upstream 412254 2329606 ~ 2332000 (-) True CI01000340_02329631_02332000
TU559770 other downstream 13381 1895801 ~ 1902272 (-) True G487884
TU557495 other downstream 1124244 786551 ~ 791409 (-) True CI01000340_00787534_00791061
TU557449 other downstream 1589937 325334 ~ 325716 (-) False G485786
TU557450 other downstream 1589990 325334 ~ 325663 (-) True G485786
TU557403 other downstream 1833558 79415 ~ 82095 (-) True CI01000340_00062787_00080635
TU560772 other upstream 2088453 4005805 ~ 4006448 (-) True G488782
TU560860 other upstream 2589844 4507196 ~ 4518120 (-) True G488862
TU560885 other upstream 2682868 4658632 ~ 4659061 (-) True G488887
TU561021 other upstream 3403401 5320753 ~ 5325144 (-) True CI01000340_05321995_05329778
TU561569 other upstream 4265938 6183290 ~ 6220642 (-) True G489516

Expression Profile