RNA id: TCONS_00020433


Basic Information

Item Value
RNA id TCONS_00020433
length 684
RNA type processed_transcript
GC content 0.41
exon number 2
gene id XLOC_010390
representative True

Chromosome Information

Item Value
chromosome id NC_007127.7
NCBI id CM002900.2
chromosome length 55266484
location 4210477 ~ 4211935 (-)
genome version GRCz11_2017_zebrafish_Genome
species zebrafish
(Danio rerio)

Sequence

cccctctcatttgggactgaggtttctgggacagagagatatgatttagtcaaggttgacagcagtgggtaacattgtgcattgtctttcccccacttgagaggacaagccatgagtaagatagaggtctctttgcggtacaagggctaatgtctgcattaatctaacaagtgtgctgtgttctgcagcccccatgactgtttttagtcgtattccccgacttatatttcaccacagtctggcagtgcctgcatactgtttttttctttgtctgtcaccttttctactttttcgtatctttttagaaagaaaccggaatgcttccacacatccgatttaaaacccgctttagtttagatcatttccagctctttttcttccccgctactagcaacacactccatttccacattactggatatgtagtgacaacagaccgcaaaggatgatggccacgcctagactgatgggaattgtagttcccgttacctcccattcgcttcattcgcctgagcaaacttttctcagaaatatagttttattgagtcatgcgactacggtaatattgaaaaaaattattattgtggtatgacggtatttacaatattgttacatccctagtcatCACAGAATAACAAAATGTTGTTTCCATTACATGCAGTGGGGGAAAATAAGTACTGAATc

Function

GO: NA

KEGG: NA

Ensembl:

ensembl_id ENSDART00000150595

JBrowse2

Neighbor

RNA id RNA type direction distance location representative gene id
TCONS_00022079 lncRNA downstream 30510 4179036 ~ 4179967 (-) True XLOC_010388
TCONS_00022078 lncRNA downstream 30563 4179036 ~ 4179914 (-) False XLOC_010388
TCONS_00022077 lncRNA downstream 30563 4179036 ~ 4179914 (-) False XLOC_010388
TCONS_00022076 lncRNA downstream 413844 3784874 ~ 3796633 (-) True XLOC_010386
TCONS_00021779 lncRNA downstream 861768 3348006 ~ 3348709 (-) True XLOC_010384
TCONS_00020434 lncRNA upstream 22792 4234727 ~ 4238361 (-) False XLOC_010391
TCONS_00020435 lncRNA upstream 22792 4234727 ~ 4241985 (-) False XLOC_010391
TCONS_00022080 lncRNA upstream 23382 4235317 ~ 4267736 (-) True XLOC_010391
TCONS_00022081 lncRNA upstream 342136 4554071 ~ 4558497 (-) True XLOC_010396
TCONS_00020448 lncRNA upstream 473728 4685663 ~ 4695623 (-) True XLOC_010399
TCONS_00020432 mRNA downstream 7455 4196932 ~ 4203022 (-) True XLOC_010389
TCONS_00020430 mRNA downstream 179091 4010967 ~ 4031386 (-) False XLOC_010387
TCONS_00020431 mRNA downstream 184212 4011282 ~ 4026265 (-) True XLOC_010387
TCONS_00020429 mRNA downstream 531501 3463727 ~ 3678976 (-) True XLOC_010385
TCONS_00020428 mRNA downstream 1082728 3103182 ~ 3127749 (-) True XLOC_010383
TCONS_00020436 mRNA upstream 75607 4287542 ~ 4317879 (-) True XLOC_010392
TCONS_00020437 mRNA upstream 301662 4513597 ~ 4531657 (-) True XLOC_010393
TCONS_00020439 mRNA upstream 329046 4540981 ~ 4546965 (-) False XLOC_010395
TCONS_00020440 mRNA upstream 330508 4542443 ~ 4547193 (-) True XLOC_010395
TCONS_00020441 mRNA upstream 358482 4570417 ~ 4610255 (-) False XLOC_010397
TCONS_00020424 other downstream 1474678 2735676 ~ 2735799 (-) True XLOC_010378
TCONS_00020422 other downstream 1568983 2638359 ~ 2641494 (-) False XLOC_010377
TCONS_00020438 other upstream 315546 4527481 ~ 4527647 (-) True XLOC_010394
TCONS_00020445 other upstream 403726 4615661 ~ 4619765 (-) False XLOC_010398
TCONS_00020450 other upstream 500729 4712664 ~ 4719385 (-) True XLOC_010400
TCONS_00020457 other upstream 849564 5061499 ~ 5061629 (-) True XLOC_010404
TCONS_00020459 other upstream 895363 5107298 ~ 5107417 (-) True XLOC_010405

Expression Profile

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