RNA id: TU556955


Basic Information

Item Value
RNA id TU556955
length 250
lncRNA type inter_gene
GC content 0.32
exon number 1
gene id G485360
representative True

Chromosome Information

Item Value
chromosome id CI01000340
NCBI id null
chromosome length 19571558
location 19983 ~ 20232 (-)
genome version v1_2015/06_NatureGenetics_grasscarp_Genome
species grasscarp
(Ctenopharyngodon idella)

Sequence

GTACTCCATGTGGCAATTTGTCATGCATTTGATCATTTTTTGCTTAAAAACTCAGTCCTGTTACTTTCAGTCCTGTTACTCATATGAAAAATAACAGGAGTGAGCAGAGTCCTCTGTTTTGTTGATTTAATAGTGTGAATATTTTGTTGATATAATACTATTCACCTGTATCATGAGTTTTACAGTTGAAATTACTTAAATTGTAGATTTTTAGGATTATTTTTACAGTGTGAATGCCATACTTGCAGGG

Function

GO: NA

KEGG: NA

JBrowse2

Neighbor

RNA id RNA type direction distance location representative gene id
TU557409 lncRNA upstream 27320 47552 ~ 48064 (-) True G485753
TU557399 lncRNA upstream 37651 57883 ~ 60043 (-) False G485744
TU557400 lncRNA upstream 37651 57883 ~ 58639 (-) True G485744
TU557401 lncRNA upstream 39953 60185 ~ 118368 (-) True G485745
TU557434 lncRNA upstream 86653 106885 ~ 113896 (-) True G485771
CI01000340_00023459_00027830.mRNA mRNA upstream 2706 22938 ~ 27830 (-) True CI01000340_00023459_00027830
CI01000340_00031137_00033754.mRNA mRNA upstream 10548 30780 ~ 33754 (-) True CI01000340_00031137_00033754
CI01000340_00035016_00043632.mRNA mRNA upstream 14784 35016 ~ 44034 (-) True CI01000340_00035016_00043632
CI01000340_00062787_00080635.mRNA mRNA upstream 42548 62780 ~ 80972 (-) False CI01000340_00062787_00080635
CI01000340_00095106_00097863.mRNA mRNA upstream 74814 95046 ~ 97863 (-) True CI01000340_00095106_00097863
TU557403 other upstream 59183 79415 ~ 82095 (-) True CI01000340_00062787_00080635
TU557449 other upstream 305102 325334 ~ 325716 (-) False G485786
TU557450 other upstream 305102 325334 ~ 325663 (-) True G485786
TU557495 other upstream 766319 786551 ~ 791409 (-) True CI01000340_00787534_00791061
TU559770 other upstream 1875569 1895801 ~ 1902272 (-) True G487884

Expression Profile