Gene
RNA
| Item | Value |
|---|---|
| RNA id | TCONS_00020490 |
| length | 883 |
| RNA type | mRNA |
| GC content | 0.47 |
| exon number | 5 |
| gene id | XLOC_010429 |
| representative | False |
| Item | Value |
|---|---|
| chromosome id | NC_007127.7 |
| NCBI id | CM002900.2 |
| chromosome length | 55266484 |
| location | 6803470 ~ 6849781 (-) |
| genome version | GRCz11_2017_zebrafish_Genome |
| species | zebrafish (Danio rerio) |
| id | name | namespace |
|---|---|---|
| GO:0005886 | plasma membrane | cellular_component |
| GO:0043209 | myelin sheath | cellular_component |
| GO:0019911 | structural constituent of myelin sheath | molecular_function |
| id | description |
|---|---|
| ZDB-GENE-030429-21 | Predicted to be a structural constituent of myelin sheath. Located in myelin sheath and plasma membrane. Is expressed in nervous system and polster. Human ortholog(s) of this gene implicated in multiple sclerosis. Orthologous to human MBP (myelin basic protein). |
| ensembl_id | ENSDART00000149570 |
| RNA id | RNA type | direction | distance | location | representative | gene id |
|---|---|---|---|---|---|---|
| TCONS_00022103 | lncRNA | downstream | 151826 | 6648030 ~ 6651719 (-) | True | XLOC_010428 |
| TCONS_00022102 | lncRNA | downstream | 168249 | 6625848 ~ 6635296 (-) | False | XLOC_010427 |
| TCONS_00020488 | lncRNA | downstream | 168249 | 6634106 ~ 6635296 (-) | True | XLOC_010427 |
| TCONS_00022101 | lncRNA | downstream | 168566 | 6620949 ~ 6634979 (-) | False | XLOC_010427 |
| TCONS_00021783 | lncRNA | downstream | 177379 | 6605385 ~ 6626166 (-) | False | XLOC_010427 |
| TCONS_00022104 | lncRNA | upstream | 380167 | 7202095 ~ 7214679 (-) | False | XLOC_010432 |
| TCONS_00022105 | lncRNA | upstream | 686173 | 7508101 ~ 7621115 (-) | False | XLOC_010436 |
| TCONS_00022106 | lncRNA | upstream | 729343 | 7551271 ~ 7554300 (-) | False | XLOC_010436 |
| TCONS_00022107 | lncRNA | upstream | 729343 | 7551271 ~ 7579989 (-) | False | XLOC_010436 |
| TCONS_00022108 | lncRNA | upstream | 729343 | 7551271 ~ 7595139 (-) | False | XLOC_010436 |
| TCONS_00020478 | mRNA | downstream | 378727 | 6395311 ~ 6424818 (-) | False | XLOC_010423 |
| TCONS_00020479 | mRNA | downstream | 378729 | 6395947 ~ 6424816 (-) | True | XLOC_010423 |
| TCONS_00020477 | mRNA | downstream | 412270 | 6386941 ~ 6391275 (-) | False | XLOC_010422 |
| TCONS_00020476 | mRNA | downstream | 425873 | 6356460 ~ 6377672 (-) | True | XLOC_010420 |
| TCONS_00020474 | mRNA | downstream | 597755 | 6182501 ~ 6205790 (-) | False | XLOC_010417 |
| TCONS_00020494 | mRNA | upstream | 115258 | 6937186 ~ 6944927 (-) | True | XLOC_010431 |
| TCONS_00020495 | mRNA | upstream | 380154 | 7202082 ~ 7214513 (-) | False | XLOC_010432 |
| TCONS_00020496 | mRNA | upstream | 392077 | 7214005 ~ 7227021 (-) | False | XLOC_010432 |
| TCONS_00020497 | mRNA | upstream | 394878 | 7216806 ~ 7239508 (-) | False | XLOC_010432 |
| TCONS_00020498 | mRNA | upstream | 395118 | 7217046 ~ 7228276 (-) | False | XLOC_010432 |
| TCONS_00020473 | other | downstream | 932856 | 5870573 ~ 5870689 (-) | True | XLOC_010416 |
| TCONS_00020472 | other | downstream | 945564 | 5821297 ~ 5857981 (-) | True | XLOC_010415 |
| TCONS_00020459 | other | downstream | 1696128 | 5107298 ~ 5107417 (-) | True | XLOC_010405 |
| TCONS_00020457 | other | downstream | 1741916 | 5061499 ~ 5061629 (-) | True | XLOC_010404 |
| TCONS_00020450 | other | downstream | 2084160 | 4712664 ~ 4719385 (-) | True | XLOC_010400 |
| TCONS_00020493 | other | upstream | 6624 | 6828552 ~ 6829635 (-) | True | XLOC_010430 |
| TCONS_00020500 | other | upstream | 398064 | 7219992 ~ 7228279 (-) | True | XLOC_010432 |
| TCONS_00020506 | other | upstream | 871953 | 7693881 ~ 7696211 (-) | False | XLOC_010438 |
| TCONS_00020507 | other | upstream | 872866 | 7694794 ~ 7696216 (-) | True | XLOC_010438 |
| TCONS_00020521 | other | upstream | 1465843 | 8287771 ~ 8288447 (-) | True | XLOC_010447 |
