Item | Value |
---|---|
RNA id | TU561086 |
length | 229 |
lncRNA type | inter_gene |
GC content | 0.35 |
exon number | 1 |
gene id | G489083 |
representative | True |
Item | Value |
---|---|
chromosome id | CI01000340 |
NCBI id | null |
chromosome length | 19571558 |
location | 5448877 ~ 5449105 (-) |
genome version | v1_2015/06_NatureGenetics_grasscarp_Genome |
species | grasscarp (Ctenopharyngodon idella) |
RNA id | RNA type | direction | distance | location | representative | gene id |
---|---|---|---|---|---|---|
TU561035 | lncRNA | downstream | 165652 | 5282913 ~ 5283225 (-) | True | G489032 |
TU561033 | lncRNA | downstream | 176592 | 5272060 ~ 5272285 (-) | True | G489030 |
TU560876 | lncRNA | downstream | 296189 | 5151315 ~ 5152688 (-) | True | G488878 |
TU560851 | lncRNA | downstream | 316128 | 5090235 ~ 5132749 (-) | True | G488853 |
TU560971 | lncRNA | downstream | 439884 | 5008653 ~ 5008993 (-) | True | G488971 |
TU561115 | lncRNA | upstream | 69077 | 5518182 ~ 5519118 (-) | True | G489108 |
TU561174 | lncRNA | upstream | 217413 | 5666518 ~ 5666834 (-) | True | G489159 |
TU561176 | lncRNA | upstream | 221426 | 5670531 ~ 5670749 (-) | True | G489161 |
TU561177 | lncRNA | upstream | 224420 | 5673525 ~ 5673873 (-) | True | G489162 |
TU561204 | lncRNA | upstream | 307260 | 5756365 ~ 5756630 (-) | True | G489189 |
CI01000340_05387790_05394295.mRNA | mRNA | downstream | 54432 | 5386989 ~ 5394445 (-) | True | CI01000340_05387790_05394295 |
CI01000340_05321995_05329778.mRNA | mRNA | downstream | 118662 | 5321035 ~ 5330215 (-) | False | CI01000340_05321995_05329778 |
CI01000340_05196551_05197666.mRNA | mRNA | downstream | 250592 | 5196128 ~ 5198285 (-) | True | CI01000340_05196551_05197666 |
CI01000340_05177681_05192437.mRNA | mRNA | downstream | 256440 | 5177593 ~ 5192437 (-) | True | CI01000340_05177681_05192437 |
CI01000340_05153622_05164991.mRNA | mRNA | downstream | 283828 | 5153559 ~ 5165049 (-) | True | CI01000340_05153622_05164991 |
CI01000340_05450963_05454017.mRNA | mRNA | upstream | 1288 | 5450393 ~ 5455519 (-) | True | CI01000340_05450963_05454017 |
CI01000340_05562762_05566332.mRNA | mRNA | upstream | 113511 | 5562616 ~ 5566332 (-) | True | CI01000340_05562762_05566332 |
CI01000340_05576979_05643605.mRNA | mRNA | upstream | 127874 | 5576979 ~ 5643605 (-) | True | CI01000340_05576979_05643605 |
CI01000340_05717260_05723962.mRNA | mRNA | upstream | 267098 | 5716203 ~ 5723962 (-) | True | CI01000340_05717260_05723962 |
CI01000340_05739446_05740109.mRNA | mRNA | upstream | 289876 | 5738981 ~ 5742133 (-) | True | CI01000340_05739446_05740109 |
TU561021 | other | downstream | 123733 | 5320753 ~ 5325144 (-) | True | CI01000340_05321995_05329778 |
TU560885 | other | downstream | 789816 | 4658632 ~ 4659061 (-) | True | G488887 |
TU560860 | other | downstream | 852616 | 4507196 ~ 4518120 (-) | True | G488862 |
TU560772 | other | downstream | 1442429 | 4005805 ~ 4006448 (-) | True | G488782 |
TU559770 | other | downstream | 3546605 | 1895801 ~ 1902272 (-) | True | G487884 |
TU561569 | other | upstream | 734185 | 6183290 ~ 6220642 (-) | True | G489516 |
TU561564 | other | upstream | 871352 | 6320457 ~ 6327372 (-) | True | G489511 |
TU564040 | other | upstream | 3350096 | 8799201 ~ 8799577 (-) | True | G491712 |
TU564232 | other | upstream | 4572787 | 10021892 ~ 10027983 (-) | True | G491883 |
TU564413 | other | upstream | 4908079 | 10360197 ~ 10362404 (-) | True | G492045 |