Gene
RNA
| Item | Value |
|---|---|
| RNA id | TCONS_00020498 |
| length | 853 |
| RNA type | mRNA |
| GC content | 0.42 |
| exon number | 6 |
| gene id | XLOC_010432 |
| representative | False |
| Item | Value |
|---|---|
| chromosome id | NC_007127.7 |
| NCBI id | CM002900.2 |
| chromosome length | 55266484 |
| location | 7202082 ~ 7239508 (-) |
| genome version | GRCz11_2017_zebrafish_Genome |
| species | zebrafish (Danio rerio) |
| id | name | namespace |
|---|---|---|
| GO:0046872 | metal ion binding | molecular_function |
| GO:0003676 | nucleic acid binding | molecular_function |
| id | description |
|---|---|
| ZDB-GENE-030131-439 | Predicted to enable 5'-nucleotidase activity. Predicted to act upstream of or within nucleotide metabolic process. Predicted to be located in membrane. Predicted to be integral component of membrane. Predicted to be active in cytoplasm. Is expressed in brain; myotome; and yolk syncytial layer. Orthologous to human NT5C3A (5'-nucleotidase, cytosolic IIIA). |
| ensembl_id | ENSDART00000149030 |
| RNA id | RNA type | direction | distance | location | representative | gene id |
|---|---|---|---|---|---|---|
| TCONS_00022104 | lncRNA | downstream | 2367 | 7202095 ~ 7214679 (-) | False | XLOC_010432 |
| TCONS_00022103 | lncRNA | downstream | 565327 | 6648030 ~ 6651719 (-) | True | XLOC_010428 |
| TCONS_00022102 | lncRNA | downstream | 581750 | 6625848 ~ 6635296 (-) | False | XLOC_010427 |
| TCONS_00020488 | lncRNA | downstream | 581750 | 6634106 ~ 6635296 (-) | True | XLOC_010427 |
| TCONS_00022101 | lncRNA | downstream | 582067 | 6620949 ~ 6634979 (-) | False | XLOC_010427 |
| TCONS_00022105 | lncRNA | upstream | 279825 | 7508101 ~ 7621115 (-) | False | XLOC_010436 |
| TCONS_00022106 | lncRNA | upstream | 322995 | 7551271 ~ 7554300 (-) | False | XLOC_010436 |
| TCONS_00022107 | lncRNA | upstream | 322995 | 7551271 ~ 7579989 (-) | False | XLOC_010436 |
| TCONS_00022108 | lncRNA | upstream | 322995 | 7551271 ~ 7595139 (-) | False | XLOC_010436 |
| TCONS_00020504 | lncRNA | upstream | 322995 | 7551271 ~ 7621114 (-) | False | XLOC_010436 |
| TCONS_00020495 | mRNA | downstream | 2533 | 7202082 ~ 7214513 (-) | False | XLOC_010432 |
| TCONS_00020494 | mRNA | downstream | 272119 | 6937186 ~ 6944927 (-) | True | XLOC_010431 |
| TCONS_00020492 | mRNA | downstream | 367265 | 6820448 ~ 6849781 (-) | True | XLOC_010429 |
| TCONS_00020491 | mRNA | downstream | 367292 | 6820448 ~ 6849754 (-) | False | XLOC_010429 |
| TCONS_00020490 | mRNA | downstream | 395118 | 6803545 ~ 6821928 (-) | False | XLOC_010429 |
| TCONS_00020501 | mRNA | upstream | 86868 | 7315144 ~ 7362806 (-) | True | XLOC_010433 |
| TCONS_00020502 | mRNA | upstream | 148195 | 7376471 ~ 7379328 (-) | True | XLOC_010434 |
| TCONS_00020503 | mRNA | upstream | 202722 | 7430998 ~ 7443388 (-) | True | XLOC_010435 |
| TCONS_00020505 | mRNA | upstream | 460092 | 7688368 ~ 7692568 (-) | True | XLOC_010437 |
| TCONS_00020508 | mRNA | upstream | 514382 | 7742658 ~ 7793457 (-) | True | XLOC_010439 |
| TCONS_00020493 | other | downstream | 387411 | 6828552 ~ 6829635 (-) | True | XLOC_010430 |
| TCONS_00020473 | other | downstream | 1346357 | 5870573 ~ 5870689 (-) | True | XLOC_010416 |
| TCONS_00020472 | other | downstream | 1359065 | 5821297 ~ 5857981 (-) | True | XLOC_010415 |
| TCONS_00020459 | other | downstream | 2109629 | 5107298 ~ 5107417 (-) | True | XLOC_010405 |
| TCONS_00020457 | other | downstream | 2155417 | 5061499 ~ 5061629 (-) | True | XLOC_010404 |
| TCONS_00020506 | other | upstream | 465605 | 7693881 ~ 7696211 (-) | False | XLOC_010438 |
| TCONS_00020507 | other | upstream | 466518 | 7694794 ~ 7696216 (-) | True | XLOC_010438 |
| TCONS_00020521 | other | upstream | 1059495 | 8287771 ~ 8288447 (-) | True | XLOC_010447 |
| TCONS_00020525 | other | upstream | 1143989 | 8372265 ~ 8395559 (-) | True | XLOC_010449 |
| TCONS_00020526 | other | upstream | 1250604 | 8478880 ~ 8479009 (-) | True | XLOC_010450 |
