RNA id: TCONS_00020505


Basic Information

Item Value
RNA id TCONS_00020505
length 882
RNA type mRNA
GC content 0.46
exon number 6
gene id XLOC_010437
representative True

Chromosome Information

Item Value
chromosome id NC_007127.7
NCBI id CM002900.2
chromosome length 55266484
location 7688368 ~ 7692568 (-)
genome version GRCz11_2017_zebrafish_Genome
species zebrafish
(Danio rerio)

Sequence

ATCCGATCTTGTTTTGGAGGCAGTATCTGAATTAGGATCATCCAGTCACGAAGTGAAGCCTGATCTGGAGCCATCATCTGCATCGGGTCCATCCAGTTGTAAGCTGACGCCTGGTCCAATTTATTCTTGGCCGGGTAAAGGATCATTTTACTCCTTTTATGATGTGGGAAAGATTCTGGGAAGTGGAGCCTATGGCACTGTGAAGTTGGCGAGACGCAGATTTGATGGCCAGAAGGTTGCTGTCAAATTTCTTAAAAAGAACACATGGGACAAGTTTATCAATGTGCCTGGATGTGCCAAACCTTTGGTTGCGGAAGTGGCAGTGAATCTGCTGCTGCGCAAATCCCAAAGCCCCCACATCGTACAAATGATCGATTGGTATGAGGAGCCAGAGAAGTACATCCTCATCATGGAATATCCAGATCCATGTGAGACCTTGGAAATGTTCATCAGTGGCAAAGGAGGATCACTAGGAGAAACTGTGGCTCGTGGCTTATTTCGCCAAGTGGTGCTCGCAGCCAAACACTGCGCTGACCAGAGCATCTTCCACAAAGACATCAAATCAGACAACATCCTGATCAACACGGACACGCTGCAGCTCAAATTGATTGACTTTGGCTGTAGTGAGCTTATTATGAACCCTACCTCTATAAATCATGAATGGGCCATGAAAGAAGCCATTTGCAGCTTGCGAAATCTGCTTATAGAAATGGTGAGCGGAGGCCAGCATTTTATGTCATTTCTGACCAGAAAAGATGATCAGTTGATTCCAGGATATTCCAAAGAGTTTCAAGATCTGATAACTCAGTGCCATAAAAAAGATGACGGCGGAAGAGCAACGTTGGAGCAGATCTTGCAGCACCAATGGCTTCAGCAGGTTTG

Function

GO:

id name namespace
GO:0043066 negative regulation of apoptotic process biological_process
GO:0006468 protein phosphorylation biological_process
GO:0007346 regulation of mitotic cell cycle biological_process
GO:0016310 phosphorylation biological_process
GO:0046777 protein autophosphorylation biological_process
GO:0005737 cytoplasm cellular_component
GO:0016740 transferase activity molecular_function
GO:0005524 ATP binding molecular_function
GO:0000166 nucleotide binding molecular_function
GO:0004672 protein kinase activity molecular_function
GO:0004674 protein serine/threonine kinase activity molecular_function
GO:0016301 kinase activity molecular_function

KEGG: NA

ZFIN:

id description
ZDB-GENE-110411-216 Predicted to enable protein serine/threonine kinase activity. Predicted to be involved in negative regulation of apoptotic process; protein autophosphorylation; and regulation of mitotic cell cycle. Predicted to act upstream of or within protein phosphorylation. Predicted to be active in cytoplasm.

Ensembl:

ensembl_id ENSDART00000148980

JBrowse2

Neighbor

RNA id RNA type direction distance location representative gene id
TCONS_00022105 lncRNA downstream 67253 7508101 ~ 7621115 (-) False XLOC_010436
TCONS_00022110 lncRNA downstream 67253 7551271 ~ 7621115 (-) False XLOC_010436
TCONS_00022109 lncRNA downstream 67253 7551271 ~ 7621115 (-) False XLOC_010436
TCONS_00022111 lncRNA downstream 67253 7572119 ~ 7621115 (-) False XLOC_010436
TCONS_00020504 lncRNA downstream 67254 7551271 ~ 7621114 (-) False XLOC_010436
TCONS_00022114 lncRNA upstream 141651 7834219 ~ 7881277 (-) False XLOC_010441
TCONS_00020513 lncRNA upstream 163932 7856500 ~ 7881252 (-) True XLOC_010441
TCONS_00020514 lncRNA upstream 275452 7968020 ~ 7973937 (-) False XLOC_010442
TCONS_00021784 lncRNA upstream 275456 7968024 ~ 7983783 (-) False XLOC_010442
TCONS_00020515 lncRNA upstream 275653 7968221 ~ 7984901 (-) True XLOC_010442
TCONS_00020503 mRNA downstream 244980 7430998 ~ 7443388 (-) True XLOC_010435
TCONS_00020502 mRNA downstream 309040 7376471 ~ 7379328 (-) True XLOC_010434
TCONS_00020501 mRNA downstream 325562 7315144 ~ 7362806 (-) True XLOC_010433
TCONS_00020497 mRNA downstream 448860 7216806 ~ 7239508 (-) False XLOC_010432
TCONS_00020508 mRNA upstream 50090 7742658 ~ 7793457 (-) True XLOC_010439
TCONS_00020509 mRNA upstream 110162 7802730 ~ 7828848 (-) False XLOC_010440
TCONS_00020510 mRNA upstream 112896 7805464 ~ 7827365 (-) False XLOC_010440
TCONS_00020511 mRNA upstream 112896 7805464 ~ 7827517 (-) False XLOC_010440
TCONS_00020512 mRNA upstream 112896 7805464 ~ 7828838 (-) True XLOC_010440
TCONS_00020500 other downstream 460089 7219992 ~ 7228279 (-) True XLOC_010432
TCONS_00020493 other downstream 858733 6828552 ~ 6829635 (-) True XLOC_010430
TCONS_00020473 other downstream 1817679 5870573 ~ 5870689 (-) True XLOC_010416
TCONS_00020472 other downstream 1830387 5821297 ~ 5857981 (-) True XLOC_010415
TCONS_00020459 other downstream 2580951 5107298 ~ 5107417 (-) True XLOC_010405
TCONS_00020506 other upstream 1313 7693881 ~ 7696211 (-) False XLOC_010438
TCONS_00020507 other upstream 2226 7694794 ~ 7696216 (-) True XLOC_010438
TCONS_00020521 other upstream 595203 8287771 ~ 8288447 (-) True XLOC_010447
TCONS_00020525 other upstream 679697 8372265 ~ 8395559 (-) True XLOC_010449
TCONS_00020526 other upstream 786312 8478880 ~ 8479009 (-) True XLOC_010450

Expression Profile

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