RNA id: TCONS_00020512


Basic Information

Item Value
RNA id TCONS_00020512
length 1509
RNA type mRNA
GC content 0.50
exon number 10
gene id XLOC_010440
representative True

Chromosome Information

Item Value
chromosome id NC_007127.7
NCBI id CM002900.2
chromosome length 55266484
location 7802730 ~ 7828848 (-)
genome version GRCz11_2017_zebrafish_Genome
species zebrafish
(Danio rerio)

Sequence

ATGGAGTGCTTTAGTTCAGATGGAGTTTCAACCACAGCGAACATGTCGGATTGCGTAACCCCCAGGCTTGGTGGTAGATGTGTTTCTGCTCGTGTCCTTCAGAGGAGGAATCTCTCAGGAGCGGATGCCATTAATGCTCTGCGGCCCTTTTACTTTGCAGTGCACCCGGATTTCTTTGGCCAGCATCCGAGAGAGAgagAGGTGAATGAAAACTCCCTCAAAAGGCTCAATGGTTATCTGGAAAACATTCAAAAGCCCGGCGAGAGATTTCCAAAACCTACAAACTTCACTTTTTATGTCAGGGACACAAAAGAAAAATCGGACCCCAATGGTAGTTTGCTAGTTTCAGGTTTCCGGTCTGTGAGTTTCACTCTACAGTCTAAGGATGTTCTGAGCACAGTGCTGGATGTTCTGAGATCATGTAGTCTTTCGGTTGAGCATATGCAGGATGTGCTCAAGCACGAGACCACAAAGAGCTCGACACAACAGCCTGGAACAGCTTTCTATCGGCCCATCAAATGGGACAAGACGTATTATACTTTCACTGGATTCAGGGACCCAGAACAGGAGCTGGAGCAGGCCAGAAGAGTGGAGCCCACACTCAGtttatgGCTGAGAAAAAATGAGCCAGAAGCCACAAAGAAACAGAATGCCAGTCTTCCACATCGTGAAGAGCTGAAAAGACTAAAAAGAGAGCTGATTCAGAAACTCGGTTTATTAAATATAAGATGGCAGCGCAAATGGGGAGTTGCACACAAATGCAGTCAGCTGCAGAGTCTGAGTCGCCTCTCCACACAAAGCCCCGAGGCTCTGCTCAACCTGAGAGGGCACATAATCATTTTTACTGACCAATCAGGGATGAATGCCTCTGGGCATGTGATGTTGGGAACAACAGATGTCCACCATCAATGGACAAAGCTCTTTGAAAGACTACCAAGCTACAGAAGCCTGTTTGAGCAGTCGGCCGCACTGAAGGAGCGCATCAGTCACCTGTTGGGAGGGATTCATGTAGTCCACATGGAGCGGTTGGGTCCAGGTCTGACTCTGGAGGAACACTATAACACCCTCAGCAGCTTTCTCAGAAGAGTCTCACCTCAGCGTCTCTCCCTGCACCCCCGCAGCCTGCAGGGCCTCTTGATGACCTTGGAAAATGACCGCTCCACCCCCTGCCTGCATGAGATGGGCCACTTCATCATCCCCACCATGTGTGACACCCTCCAGCTGCAGAACTTCCTCCAGAGTCAGGCTCACGAGGCCCGCAGACGCATGCTGAGCAAAGACAAGTTGGAGGCGGAGGAAGAAGACATCATTTCCAGCTGTCTGGAGGATTTGTGTCTGCGCAGCCTGTCTAAAGAGCCCAGCGTGTCCAGCAATCAGATGATCCCCTGCTGCCGGCGTCTGATGGAGGAACGATCTCCTCAAATGCAAGgtcttcatctgtgtgtgtcGCATTTCTATTCAGTCATGCAGGACGGGGATCTGTGTATTCCCTGGAACTGGAAAGGCTGA

Function

GO: NA

KEGG: NA

ZFIN:

id description
ZDB-GENE-160113-67 Orthologous to human TCAIM (T cell activation inhibitor, mitochondrial).

Ensembl:

ensembl_id ENSDART00000191434

JBrowse2

Neighbor

RNA id RNA type direction distance location representative gene id
TCONS_00022110 lncRNA downstream 184349 7551271 ~ 7621115 (-) False XLOC_010436
TCONS_00022109 lncRNA downstream 184349 7551271 ~ 7621115 (-) False XLOC_010436
TCONS_00022111 lncRNA downstream 184349 7572119 ~ 7621115 (-) False XLOC_010436
TCONS_00020504 lncRNA downstream 184350 7551271 ~ 7621114 (-) False XLOC_010436
TCONS_00022112 lncRNA downstream 184359 7598373 ~ 7621105 (-) False XLOC_010436
TCONS_00022114 lncRNA upstream 5381 7834219 ~ 7881277 (-) False XLOC_010441
TCONS_00020513 lncRNA upstream 27662 7856500 ~ 7881252 (-) True XLOC_010441
TCONS_00020514 lncRNA upstream 139182 7968020 ~ 7973937 (-) False XLOC_010442
TCONS_00021784 lncRNA upstream 139186 7968024 ~ 7983783 (-) False XLOC_010442
TCONS_00020515 lncRNA upstream 139383 7968221 ~ 7984901 (-) True XLOC_010442
TCONS_00020508 mRNA downstream 12007 7742658 ~ 7793457 (-) True XLOC_010439
TCONS_00020505 mRNA downstream 112896 7688368 ~ 7692568 (-) True XLOC_010437
TCONS_00020503 mRNA downstream 362076 7430998 ~ 7443388 (-) True XLOC_010435
TCONS_00020502 mRNA downstream 426136 7376471 ~ 7379328 (-) True XLOC_010434
TCONS_00020501 mRNA downstream 442658 7315144 ~ 7362806 (-) True XLOC_010433
TCONS_00020516 mRNA upstream 219058 8047896 ~ 8120203 (-) False XLOC_010443
TCONS_00020517 mRNA upstream 222423 8051261 ~ 8132742 (-) True XLOC_010443
TCONS_00020518 mRNA upstream 359350 8188188 ~ 8217495 (-) False XLOC_010445
TCONS_00020519 mRNA upstream 359350 8188188 ~ 8251985 (-) True XLOC_010445
TCONS_00020520 mRNA upstream 429365 8258203 ~ 8280885 (-) True XLOC_010446
TCONS_00020507 other downstream 109248 7694794 ~ 7696216 (-) True XLOC_010438
TCONS_00020506 other downstream 109253 7693881 ~ 7696211 (-) False XLOC_010438
TCONS_00020500 other downstream 577185 7219992 ~ 7228279 (-) True XLOC_010432
TCONS_00020493 other downstream 975829 6828552 ~ 6829635 (-) True XLOC_010430
TCONS_00020473 other downstream 1934775 5870573 ~ 5870689 (-) True XLOC_010416
TCONS_00020521 other upstream 458933 8287771 ~ 8288447 (-) True XLOC_010447
TCONS_00020525 other upstream 543427 8372265 ~ 8395559 (-) True XLOC_010449
TCONS_00020526 other upstream 650042 8478880 ~ 8479009 (-) True XLOC_010450
TCONS_00020535 other upstream 1473241 9302079 ~ 9302194 (-) True XLOC_010455
TCONS_00020559 other upstream 2426369 10255207 ~ 10261625 (-) True XLOC_010469

Expression Profile

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