RNA id: TU567549


Basic Information

Item Value
RNA id TU567549
length 339
lncRNA type inter_gene
GC content 0.50
exon number 1
gene id G494851
representative True

Chromosome Information

Item Value
chromosome id CI01000340
NCBI id null
chromosome length 19571558
location 14446750 ~ 14447088 (-)
genome version v1_2015/06_NatureGenetics_grasscarp_Genome
species grasscarp
(Ctenopharyngodon idella)

Sequence

GAGTCTGGGTTTGGCGGTTGCCAGAAGAACGATACTTGCCTGACTGCATTGTGTCAAGTGTAAAGTTTGGTGGAGGGGGGATTATGGTGTGGGGTTGTTTTTCAGGGGTTGGGCTTGGCCCCTTAGTTCCAGTGAAAGGAACTCTTAATGCTTCAGCATACCAAGACATTTTAGACAATTTCATGCTCCCAACTTTGTGGGAACAGTTTGGGGATGGCCCCTTCCTGTTCCAACATGACTGCGCACCAGTGCACAAAGCAAGGTCCATAAAGACATGGATGAGCGAGTTTGATGTGGAGGAACTTGACTGGCCTGCACAGAGTCCTGACCTCAACCCGA

Function

GO: NA

KEGG: NA

JBrowse2

Neighbor

RNA id RNA type direction distance location representative gene id
TU567423 lncRNA downstream 6546 14439366 ~ 14440204 (-) True G494729
TU567434 lncRNA downstream 14652 14430893 ~ 14432098 (-) True G494740
TU567456 lncRNA downstream 64458 14379370 ~ 14382292 (-) True G494762
TU567461 lncRNA downstream 94527 14352008 ~ 14352223 (-) True G494767
TU567506 lncRNA downstream 162686 14282712 ~ 14284064 (-) True G494812
TU567550 lncRNA upstream 96 14447184 ~ 14447517 (-) True G494852
TU567413 lncRNA upstream 17170 14464258 ~ 14465928 (-) True G494719
TU567405 lncRNA upstream 68253 14515341 ~ 14516181 (-) False CI01000340_14515689_14516087
TU567551 lncRNA upstream 69428 14516516 ~ 14516739 (-) True CI01000340_14515689_14516087
TU567554 lncRNA upstream 95330 14542418 ~ 14543519 (-) True G494855
CI01000340_14442412_14444888.mRNA mRNA downstream 1840 14441414 ~ 14444910 (-) True CI01000340_14442412_14444888
CI01000340_14384828_14388836.mRNA mRNA downstream 57317 14384092 ~ 14389433 (-) True CI01000340_14384828_14388836
CI01000340_14318434_14336130.mRNA mRNA downstream 110492 14318387 ~ 14336258 (-) False CI01000340_14318434_14336130
CI01000340_14309675_14311339.mRNA mRNA downstream 135314 14309643 ~ 14311436 (-) True CI01000340_14309675_14311339
CI01000340_14255925_14261708.mRNA mRNA downstream 184997 14255757 ~ 14261753 (-) True CI01000340_14255925_14261708
CI01000340_14455602_14462035.mRNA mRNA upstream 8514 14455602 ~ 14463807 (-) True CI01000340_14455602_14462035
CI01000340_14467309_14496470.mRNA mRNA upstream 19881 14466969 ~ 14496563 (-) True CI01000340_14467309_14496470
CI01000340_14506530_14506877.mRNA mRNA upstream 59318 14506406 ~ 14506877 (-) True CI01000340_14506530_14506877
CI01000340_14515689_14516087.mRNA mRNA upstream 68321 14515409 ~ 14516526 (-) False CI01000340_14515689_14516087
CI01000340_14547725_14551493.mRNA mRNA upstream 100482 14547570 ~ 14552983 (-) False CI01000340_14547725_14551493
TU567402 other downstream 126473 14213348 ~ 14320277 (-) True G494710
TU567403 other downstream 126473 14213348 ~ 14320277 (-) False G494710
TU567401 other downstream 126473 14320240 ~ 14320277 (-) True G494710
TU566559 other downstream 1773225 12646587 ~ 12673525 (-) True G493928
TU565795 other downstream 2329850 12108993 ~ 12116900 (-) True G493266
TU567585 other upstream 99911 14548727 ~ 14548779 (-) False G494879
TU567587 other upstream 99911 14548727 ~ 14555168 (-) True G494879
TU567578 other upstream 110535 14557623 ~ 14559023 (-) True G494872
TU568273 other upstream 1159653 15606741 ~ 15612563 (-) True G495475
TU568418 other upstream 1724589 16179988 ~ 16180085 (-) True G495611

Expression Profile