RNA id: TU567618


Basic Information

Item Value
RNA id TU567618
length 211
lncRNA type inter_gene
GC content 0.39
exon number 1
gene id G494909
representative True

Chromosome Information

Item Value
chromosome id CI01000340
NCBI id null
chromosome length 19571558
location 14769004 ~ 14769214 (-)
genome version v1_2015/06_NatureGenetics_grasscarp_Genome
species grasscarp
(Ctenopharyngodon idella)

Sequence

CCCTAATGTTATTAAGTGTCGAGAATACTTTTTGTGTGCAAAAACAAAACAAAAATAACAACTTTTTTCAGCAAATTCGTCTCTCCCCTGTCATTCTCCTACACTATTTACGTTCAGCGCTTCCAGGTTCTACGTCTGAATGCCGGCTCAGTATTGGCCGATGCTGGTCACGTGAGTTGAATAAGGTCGTTATTTTTGTTTTGTTTTTGTG

Function

GO: NA

KEGG: NA

JBrowse2

Neighbor

RNA id RNA type direction distance location representative gene id
TU567552 lncRNA downstream 12285 14754883 ~ 14756719 (-) True G494854
TU567561 lncRNA downstream 19564 14747970 ~ 14749440 (-) True G494861
TU567573 lncRNA downstream 23947 14743717 ~ 14745057 (-) True G494867
TU567611 lncRNA downstream 52430 14716291 ~ 14716574 (-) True G494902
TU567575 lncRNA downstream 204377 14562097 ~ 14564627 (-) True G494869
TU568233 lncRNA upstream 525059 15294273 ~ 15295000 (-) True G495450
TU568163 lncRNA upstream 648558 15419793 ~ 15419868 (-) False G495398
TU568165 lncRNA upstream 648558 15419793 ~ 15419989 (-) True G495398
TU568162 lncRNA upstream 648632 15419793 ~ 15419868 (-) True G495398
TU568253 lncRNA upstream 656435 15425649 ~ 15430109 (-) True G495459
CI01000340_14576054_14589873.mRNA mRNA downstream 178801 14575836 ~ 14590203 (-) True CI01000340_14576054_14589873
CI01000340_14547725_14551493.mRNA mRNA downstream 216021 14547570 ~ 14552983 (-) False CI01000340_14547725_14551493
CI01000340_14515689_14516087.mRNA mRNA downstream 252478 14515409 ~ 14516526 (-) False CI01000340_14515689_14516087
CI01000340_14506530_14506877.mRNA mRNA downstream 262127 14506406 ~ 14506877 (-) True CI01000340_14506530_14506877
CI01000340_14467309_14496470.mRNA mRNA downstream 272441 14466969 ~ 14496563 (-) True CI01000340_14467309_14496470
CI01000340_14823900_14824982.mRNA mRNA upstream 54557 14823771 ~ 14825387 (-) True CI01000340_14823900_14824982
CI01000340_14835497_14846831.mRNA mRNA upstream 66022 14835236 ~ 14846831 (-) True CI01000340_14835497_14846831
CI01000340_14872482_14891188.mRNA mRNA upstream 102866 14872080 ~ 14891618 (-) True CI01000340_14872482_14891188
CI01000340_14894726_14899916.mRNA mRNA upstream 124379 14893593 ~ 14899916 (-) True CI01000340_14894726_14899916
CI01000340_14910995_14919035.mRNA mRNA upstream 141385 14910599 ~ 14919357 (-) True CI01000340_14910995_14919035
TU567578 other downstream 209981 14557623 ~ 14559023 (-) True G494872
TU567587 other downstream 213836 14548727 ~ 14555168 (-) True G494879
TU567585 other downstream 218506 14548727 ~ 14548779 (-) False G494879
TU567403 other downstream 448727 14213348 ~ 14320277 (-) False G494710
TU568273 other upstream 837527 15606741 ~ 15612563 (-) True G495475
TU568418 other upstream 1402463 16179988 ~ 16180085 (-) True G495611
TU569607 other upstream 1745685 16519911 ~ 16519974 (-) True G496628
TU569869 other upstream 2274509 17043723 ~ 17045688 (-) True G496845
TU569877 other upstream 2408278 17177492 ~ 17242739 (-) True G496853

Expression Profile