RNA id: TCONS_00020526


Basic Information

Item Value
RNA id TCONS_00020526
length 130
RNA type rRNA
GC content 0.58
exon number 1
gene id XLOC_010450
representative True

Chromosome Information

Item Value
chromosome id NC_007127.7
NCBI id CM002900.2
chromosome length 55266484
location 8478880 ~ 8479009 (-)
genome version GRCz11_2017_zebrafish_Genome
species zebrafish
(Danio rerio)

Sequence

gacggcagctagctctctgcatctctcacatggtcgcccgctgaagctaagcagggctgcgcccgatcagtacctggatgggagaccacatgggaaagcaccacatgggaaagcaagattgctgccggaa

Function

GO: NA

KEGG: NA

Ensembl:

ensembl_id ENSDART00000119791

JBrowse2

Neighbor

RNA id RNA type direction distance location representative gene id
TCONS_00020523 lncRNA downstream 175701 8300824 ~ 8303179 (-) True XLOC_010448
TCONS_00021785 lncRNA downstream 336568 8140712 ~ 8142312 (-) True XLOC_010444
TCONS_00020515 lncRNA downstream 493979 7968221 ~ 7984901 (-) True XLOC_010442
TCONS_00021784 lncRNA downstream 495097 7968024 ~ 7983783 (-) False XLOC_010442
TCONS_00020514 lncRNA downstream 504943 7968020 ~ 7973937 (-) False XLOC_010442
TCONS_00022115 lncRNA upstream 72780 8551789 ~ 8565101 (-) True XLOC_010451
TCONS_00022116 lncRNA upstream 189972 8668981 ~ 8679462 (-) True XLOC_010452
TCONS_00020539 lncRNA upstream 962012 9441021 ~ 9442003 (-) False XLOC_010457
TCONS_00020541 lncRNA upstream 1085494 9564503 ~ 9566371 (-) True XLOC_010458
TCONS_00022117 lncRNA upstream 1280167 9759176 ~ 9761753 (-) True XLOC_010461
TCONS_00020522 mRNA downstream 136131 8298542 ~ 8342749 (-) False XLOC_010448
TCONS_00020520 mRNA downstream 197995 8258203 ~ 8280885 (-) True XLOC_010446
TCONS_00020519 mRNA downstream 226895 8188188 ~ 8251985 (-) True XLOC_010445
TCONS_00020518 mRNA downstream 261385 8188188 ~ 8217495 (-) False XLOC_010445
TCONS_00020517 mRNA downstream 346138 8051261 ~ 8132742 (-) True XLOC_010443
TCONS_00020529 mRNA upstream 50763 8529772 ~ 8663552 (-) False XLOC_010451
TCONS_00020528 mRNA upstream 50763 8529772 ~ 8663552 (-) False XLOC_010451
TCONS_00020527 mRNA upstream 50763 8529772 ~ 8663552 (-) False XLOC_010451
TCONS_00020530 mRNA upstream 51622 8530631 ~ 8663493 (-) False XLOC_010451
TCONS_00020531 mRNA upstream 53349 8532358 ~ 8613499 (-) False XLOC_010451
TCONS_00020525 other downstream 83321 8372265 ~ 8395559 (-) True XLOC_010449
TCONS_00020521 other downstream 190433 8287771 ~ 8288447 (-) True XLOC_010447
TCONS_00020507 other downstream 782664 7694794 ~ 7696216 (-) True XLOC_010438
TCONS_00020506 other downstream 782669 7693881 ~ 7696211 (-) False XLOC_010438
TCONS_00020500 other downstream 1250601 7219992 ~ 7228279 (-) True XLOC_010432
TCONS_00020535 other upstream 823070 9302079 ~ 9302194 (-) True XLOC_010455
TCONS_00020559 other upstream 1776198 10255207 ~ 10261625 (-) True XLOC_010469
TCONS_00020565 other upstream 2350800 10829809 ~ 10837232 (-) False XLOC_010476
TCONS_00020567 other upstream 2437281 10916290 ~ 10916404 (-) True XLOC_010478
TCONS_00020572 other upstream 3281910 11760919 ~ 11779472 (-) False XLOC_010484