RNA id: TU570144



Basic Information


Item Value
RNA id TU570144
length 273
lncRNA type inter_gene
GC content 0.34
exon number 1
gene id G497094
representative True

Chromosome Information


Item Value
chromosome id CI01000340
NCBI id null
chromosome length 19571558
location 18044182 ~ 18044454 (-)
genome version v1_2015/06_NatureGenetics_grasscarp_Genome
species grasscarp
(Ctenopharyngodon idella)

Sequence


GTTTATTGTGTACCTGTAATTTGGATTTGGGGTCATTTTGCTTCCATAACATGTCATGCTAGTGGGAAGAAAACATCCAAAATAGATATTTACGTGTTCATTTTATTACCCTCTGTAGACTTCAATTACAATACATATATCTTTAAACTAAAGGCCGTTTTCTCAAAATGTGTTATTTTCTCCGGCACTGAGTCAGAAATCTCCACTTCAGCACCAAACTTTACAGTTATATAGGTATTATATTTATATTCTTCTGAGAGCTAGGGTTTGTTC

Function


GO: NA

KEGG: NA

JBrowse2


Neighbor


RNA id RNA type direction distance location representative gene id
TU570142 lncRNA downstream 37167 18006655 ~ 18007015 (-) True G497092
TU570131 lncRNA downstream 80104 17963692 ~ 17964078 (-) True G497081
TU570103 lncRNA downstream 143583 17900375 ~ 17900599 (-) True G497054
TU570102 lncRNA downstream 150867 17892903 ~ 17893315 (-) True G497053
TU570085 lncRNA downstream 174098 17869865 ~ 17870084 (-) True G497037
TU570151 lncRNA upstream 5874 18050328 ~ 18051186 (-) False G497099
TU570149 lncRNA upstream 6274 18050728 ~ 18051186 (-) False G497099
TU570150 lncRNA upstream 6274 18050728 ~ 18051186 (-) False G497099
TU570152 lncRNA upstream 6274 18050728 ~ 18051186 (-) True G497099
TU570161 lncRNA upstream 19671 18064125 ~ 18065085 (-) False G497105
CI01000340_18030360_18041157.mRNA mRNA downstream 3025 18030245 ~ 18041157 (-) True CI01000340_18030360_18041157
CI01000340_18013773_18027276.mRNA mRNA downstream 16906 18013531 ~ 18027276 (-) True CI01000340_18013773_18027276
CI01000340_17996222_18008569.mRNA mRNA downstream 33344 17995434 ~ 18010838 (-) True CI01000340_17996222_18008569
CI01000340_17700896_17753828.mRNA mRNA downstream 290354 17700825 ~ 17753828 (-) True CI01000340_17700896_17753828
CI01000340_17668871_17688583.mRNA mRNA downstream 355021 17668455 ~ 17689161 (-) True CI01000340_17668871_17688583
CI01000340_18091595_18104080.mRNA mRNA upstream 46354 18090808 ~ 18104080 (-) True CI01000340_18091595_18104080
CI01000340_18185156_18206837.mRNA mRNA upstream 140456 18184910 ~ 18206837 (-) True CI01000340_18185156_18206837
CI01000340_18228042_18229807.mRNA mRNA upstream 182721 18227175 ~ 18229807 (-) True CI01000340_18228042_18229807
CI01000340_18302048_18303998.mRNA mRNA upstream 256934 18301388 ~ 18304048 (-) True CI01000340_18302048_18303998
CI01000340_18408556_18408855.mRNA mRNA upstream 364068 18408522 ~ 18408855 (-) True CI01000340_18408556_18408855
TU569877 other downstream 801443 17177492 ~ 17242739 (-) True G496853
TU569869 other downstream 998494 17043723 ~ 17045688 (-) True G496845
TU569607 other downstream 1524208 16519911 ~ 16519974 (-) True G496628
TU568418 other downstream 1864097 16179988 ~ 16180085 (-) True G495611
TU568273 other downstream 2431619 15606741 ~ 15612563 (-) True G495475
TU570236 other upstream 374864 18442995 ~ 18454680 (-) True G497176
TU570552 other upstream 1114415 19158869 ~ 19164472 (-) False G497442

Expression Profile