Gene
RNA
| Item | Value |
|---|---|
| RNA id | TCONS_00020545 |
| length | 963 |
| RNA type | mRNA |
| GC content | 0.50 |
| exon number | 5 |
| gene id | XLOC_010462 |
| representative | True |
| Item | Value |
|---|---|
| chromosome id | NC_007127.7 |
| NCBI id | CM002900.2 |
| chromosome length | 55266484 |
| location | 9787383 ~ 9802998 (-) |
| genome version | GRCz11_2017_zebrafish_Genome |
| species | zebrafish (Danio rerio) |
| id | name | namespace |
|---|---|---|
| GO:0019885 | antigen processing and presentation of endogenous peptide antigen via MHC class I | biological_process |
| GO:0016020 | membrane | cellular_component |
| id | description |
|---|---|
| ZDB-GENE-121003-1 | Predicted to act upstream of or within antigen processing and presentation of endogenous peptide antigen via MHC class I. Predicted to be located in membrane. Orthologous to human TAPBPL (TAP binding protein like). |
| ensembl_id | ENSDART00000081208 |
| RNA id | RNA type | direction | distance | location | representative | gene id |
|---|---|---|---|---|---|---|
| TCONS_00022117 | lncRNA | downstream | 32115 | 9759176 ~ 9761753 (-) | True | XLOC_010461 |
| TCONS_00020541 | lncRNA | downstream | 227497 | 9564503 ~ 9566371 (-) | True | XLOC_010458 |
| TCONS_00020539 | lncRNA | downstream | 351865 | 9441021 ~ 9442003 (-) | False | XLOC_010457 |
| TCONS_00022116 | lncRNA | downstream | 1114406 | 8668981 ~ 8679462 (-) | True | XLOC_010452 |
| TCONS_00022115 | lncRNA | downstream | 1228767 | 8551789 ~ 8565101 (-) | True | XLOC_010451 |
| TCONS_00022118 | lncRNA | upstream | 210536 | 10012985 ~ 10013605 (-) | True | XLOC_010466 |
| TCONS_00020554 | lncRNA | upstream | 262477 | 10064926 ~ 10065880 (-) | False | XLOC_010468 |
| TCONS_00020557 | lncRNA | upstream | 402661 | 10205110 ~ 10207842 (-) | False | XLOC_010469 |
| TCONS_00022119 | lncRNA | upstream | 618721 | 10421170 ~ 10429820 (-) | False | XLOC_010472 |
| TCONS_00022120 | lncRNA | upstream | 618721 | 10421170 ~ 10429893 (-) | True | XLOC_010472 |
| TCONS_00020543 | mRNA | downstream | 99046 | 9680908 ~ 9694822 (-) | True | XLOC_010460 |
| TCONS_00020542 | mRNA | downstream | 117886 | 9672126 ~ 9675982 (-) | True | XLOC_010459 |
| TCONS_00020538 | mRNA | downstream | 340277 | 9433738 ~ 9453591 (-) | False | XLOC_010457 |
| TCONS_00020540 | mRNA | downstream | 344156 | 9446920 ~ 9449712 (-) | True | XLOC_010457 |
| TCONS_00020537 | mRNA | downstream | 370133 | 9422411 ~ 9423735 (-) | True | XLOC_010456 |
| TCONS_00020546 | mRNA | upstream | 4814 | 9807263 ~ 9830451 (-) | True | XLOC_010463 |
| TCONS_00020547 | mRNA | upstream | 30807 | 9833256 ~ 9897613 (-) | False | XLOC_010464 |
| TCONS_00020548 | mRNA | upstream | 32562 | 9835011 ~ 9879407 (-) | False | XLOC_010464 |
| TCONS_00020549 | mRNA | upstream | 32635 | 9835084 ~ 9869056 (-) | False | XLOC_010464 |
| TCONS_00020550 | mRNA | upstream | 32743 | 9835192 ~ 9897769 (-) | True | XLOC_010464 |
| TCONS_00020535 | other | downstream | 491674 | 9302079 ~ 9302194 (-) | True | XLOC_010455 |
| TCONS_00020526 | other | downstream | 1314859 | 8478880 ~ 8479009 (-) | True | XLOC_010450 |
| TCONS_00020525 | other | downstream | 1398309 | 8372265 ~ 8395559 (-) | True | XLOC_010449 |
| TCONS_00020521 | other | downstream | 1505421 | 8287771 ~ 8288447 (-) | True | XLOC_010447 |
| TCONS_00020507 | other | downstream | 2097652 | 7694794 ~ 7696216 (-) | True | XLOC_010438 |
| TCONS_00020559 | other | upstream | 452758 | 10255207 ~ 10261625 (-) | True | XLOC_010469 |
| TCONS_00020565 | other | upstream | 1027360 | 10829809 ~ 10837232 (-) | False | XLOC_010476 |
| TCONS_00020567 | other | upstream | 1113841 | 10916290 ~ 10916404 (-) | True | XLOC_010478 |
| TCONS_00020572 | other | upstream | 1958470 | 11760919 ~ 11779472 (-) | False | XLOC_010484 |
| TCONS_00020591 | other | upstream | 2209625 | 12012074 ~ 12012188 (-) | True | XLOC_010492 |
