RNA id: TU570337


Basic Information

Item Value
RNA id TU570337
length 220
lncRNA type intronic
GC content 0.32
exon number 2
gene id G497257
representative True

Chromosome Information

Item Value
chromosome id CI01000340
NCBI id null
chromosome length 19571558
location 18687208 ~ 18687507 (-)
genome version v1_2015/06_NatureGenetics_grasscarp_Genome
species grasscarp
(Ctenopharyngodon idella)

Sequence

TAAAGTCAGAATTGCGAGATATAAAGTCAGAATTGCGAGTTATAAAGTCAGAATTGCGAGATATAAAGTCAGAATTGTGAGATATAAAGTCAGAATTGCGAGTTATAAAGTCAGAATTGCGAGATATAAAGTCAGAATTGCGAGATATAAAGTCAGAATTGCGAGTTATAAAGTCAGAATTGTGAGATATAAAGTCAGAATTGCGAGTTATAAAGTCAGA

Function

GO: NA

KEGG: NA

JBrowse2

Neighbor

RNA id RNA type direction distance location representative gene id
TU570302 lncRNA downstream 16905 18669212 ~ 18670303 (-) True G497229
TU570327 lncRNA downstream 40741 18645497 ~ 18646467 (-) True G497251
TU570280 lncRNA downstream 93322 18588904 ~ 18593886 (-) True CI01000340_18587476_18607063
TU570272 lncRNA downstream 139811 18546952 ~ 18547397 (-) True G497209
TU570263 lncRNA downstream 156580 18528327 ~ 18530628 (-) True G497200
TU570351 lncRNA upstream 46156 18733663 ~ 18811168 (-) False G497271
TU570352 lncRNA upstream 46156 18733663 ~ 18821869 (-) True G497271
TU570368 lncRNA upstream 58015 18745522 ~ 18748741 (-) True G497279
TU570389 lncRNA upstream 227839 18915346 ~ 18966510 (-) True G497288
TU570500 lncRNA upstream 398921 19086428 ~ 19087628 (-) True G497393
CI01000340_18654497_18656059.mRNA mRNA downstream 31149 18654450 ~ 18656059 (-) True CI01000340_18654497_18656059
CI01000340_18587476_18607063.mRNA mRNA downstream 80075 18587330 ~ 18607133 (-) False CI01000340_18587476_18607063
CI01000340_18572454_18585230.mRNA mRNA downstream 101978 18572454 ~ 18585230 (-) True CI01000340_18572454_18585230
CI01000340_18540426_18543271.mRNA mRNA downstream 142908 18540261 ~ 18544300 (-) True CI01000340_18540426_18543271
CI01000340_18485385_18491222.mRNA mRNA downstream 195615 18484847 ~ 18491593 (-) True CI01000340_18485385_18491222
CI01000340_18706881_18719031.mRNA mRNA upstream 18564 18706071 ~ 18719031 (-) True CI01000340_18706881_18719031
CI01000340_18871236_18880189.mRNA mRNA upstream 183437 18870944 ~ 18880189 (-) True CI01000340_18871236_18880189
CI01000340_18900583_18906154.mRNA mRNA upstream 212170 18899677 ~ 18906154 (-) True CI01000340_18900583_18906154
CI01000340_19062314_19072746.mRNA mRNA upstream 373578 19061085 ~ 19072746 (-) True CI01000340_19062314_19072746
CI01000340_19115929_19119348.mRNA mRNA upstream 428098 19115605 ~ 19119348 (-) True CI01000340_19115929_19119348
TU570236 other downstream 232528 18442995 ~ 18454680 (-) True G497176
TU569877 other downstream 1444469 17177492 ~ 17242739 (-) True G496853
TU569869 other downstream 1641520 17043723 ~ 17045688 (-) True G496845
TU569607 other downstream 2167234 16519911 ~ 16519974 (-) True G496628
TU568418 other downstream 2507123 16179988 ~ 16180085 (-) True G495611
TU570552 other upstream 471362 19158869 ~ 19164472 (-) False G497442

Expression Profile