RNA id: TU570554



Basic Information


Item Value
RNA id TU570554
length 223
lncRNA type intronic
GC content 0.28
exon number 2
gene id G497444
representative True

Chromosome Information


Item Value
chromosome id CI01000340
NCBI id null
chromosome length 19571558
location 19168075 ~ 19168375 (-)
genome version v1_2015/06_NatureGenetics_grasscarp_Genome
species grasscarp
(Ctenopharyngodon idella)

Sequence


GTAATAATCAAGTAATGTTCAAAAGTAACGTTCAAAAGTAACGTTCAAAAGCAACAATCAAGTAATGTTAAAATGTAACGTTCAAAAGTAACATTTAAAAGTAGCGTTCAAAAGTAACAATCAAGTAATATTCAAAAGTAGCGTTCAAAAGTAATAATCAAGTAATGTTCAAAAGTAACATTCAAGTAACGTTCAAAAGTAGCGTTCAAAAGTAGCGTTCAAA

Function


GO: NA

KEGG: NA

JBrowse2


Neighbor


RNA id RNA type direction distance location representative gene id
TU570549 lncRNA downstream 1297 19160236 ~ 19166778 (-) False G497442
TU570551 lncRNA downstream 1297 19165863 ~ 19166778 (-) True G497442
TU570547 lncRNA downstream 12818 19154833 ~ 19155257 (-) True G497440
TU570500 lncRNA downstream 80447 19086428 ~ 19087628 (-) True G497393
TU570389 lncRNA downstream 201565 18915346 ~ 18966510 (-) True G497288
TU570450 lncRNA upstream 137868 19306243 ~ 19363326 (-) True G497343
TU570482 lncRNA upstream 247078 19415453 ~ 19420039 (-) True G497375
TU570448 lncRNA upstream 260986 19429361 ~ 19431737 (-) True G497341
TU570457 lncRNA upstream 280064 19448439 ~ 19451285 (-) True G497350
TU570458 lncRNA upstream 323549 19491924 ~ 19494481 (-) True G497351
CI01000340_19142339_19149140.mRNA mRNA downstream 18935 19141886 ~ 19149140 (-) True CI01000340_19142339_19149140
CI01000340_19115929_19119348.mRNA mRNA downstream 48727 19115605 ~ 19119348 (-) True CI01000340_19115929_19119348
CI01000340_19062314_19072746.mRNA mRNA downstream 95329 19061085 ~ 19072746 (-) True CI01000340_19062314_19072746
CI01000340_18900583_18906154.mRNA mRNA downstream 261921 18899677 ~ 18906154 (-) True CI01000340_18900583_18906154
CI01000340_18871236_18880189.mRNA mRNA downstream 287886 18870944 ~ 18880189 (-) True CI01000340_18871236_18880189
CI01000340_19194730_19198554.mRNA mRNA upstream 24990 19193365 ~ 19198554 (-) True CI01000340_19194730_19198554
CI01000340_19213032_19215967.mRNA mRNA upstream 43986 19212361 ~ 19216620 (-) True CI01000340_19213032_19215967
CI01000340_19231651_19244239.mRNA mRNA upstream 62516 19230891 ~ 19244964 (-) True CI01000340_19231651_19244239
CI01000340_19247600_19253297.mRNA mRNA upstream 79098 19247473 ~ 19253297 (-) True CI01000340_19247600_19253297
CI01000340_19254583_19259959.mRNA mRNA upstream 85851 19254226 ~ 19259959 (-) True CI01000340_19254583_19259959
TU570552 other downstream 3603 19158869 ~ 19164472 (-) False G497442
TU570236 other downstream 713395 18442995 ~ 18454680 (-) True G497176
TU569877 other downstream 1925336 17177492 ~ 17242739 (-) True G496853
TU569869 other downstream 2122387 17043723 ~ 17045688 (-) True G496845
TU569607 other downstream 2648101 16519911 ~ 16519974 (-) True G496628

Expression Profile