RNA id: TCONS_00020604


Basic Information

Item Value
RNA id TCONS_00020604
length 59
RNA type snRNA
GC content 0.34
exon number 1
gene id XLOC_010498
representative True

Chromosome Information

Item Value
chromosome id NC_007127.7
NCBI id CM002900.2
chromosome length 55266484
location 12247862 ~ 12247920 (-)
genome version GRCz11_2017_zebrafish_Genome
species zebrafish
(Danio rerio)

Sequence

TAATGAAAAGAGCTCTTTTAGTATTTGTCCAGTAGGTTTCCTATAAAAAGGAAGCCCAT

Function

GO: NA

KEGG: NA

Ensembl:

ensembl_id ENSDART00000116738

JBrowse2

Neighbor

RNA id RNA type direction distance location representative gene id
TCONS_00020593 lncRNA downstream 193628 12052306 ~ 12054234 (-) False XLOC_010493
TCONS_00022129 lncRNA downstream 242778 11992566 ~ 12005084 (-) True XLOC_010491
TCONS_00022128 lncRNA downstream 284783 11961685 ~ 11963079 (-) True XLOC_010489
TCONS_00022127 lncRNA downstream 286369 11960630 ~ 11961493 (-) False XLOC_010489
TCONS_00020576 lncRNA downstream 468418 11775141 ~ 11779444 (-) False XLOC_010484
TCONS_00020617 lncRNA upstream 230777 12478697 ~ 12481849 (-) False XLOC_010505
TCONS_00020619 lncRNA upstream 257009 12504929 ~ 12512576 (-) False XLOC_010506
TCONS_00020621 lncRNA upstream 263266 12511186 ~ 12512593 (-) True XLOC_010506
TCONS_00020622 lncRNA upstream 276812 12524732 ~ 12532027 (-) True XLOC_010507
TCONS_00021787 lncRNA upstream 315310 12563230 ~ 12566004 (-) True XLOC_010508
TCONS_00020602 mRNA downstream 11500 12174437 ~ 12236362 (-) True XLOC_010496
TCONS_00020600 mRNA downstream 74215 12106132 ~ 12173647 (-) False XLOC_010495
TCONS_00020599 mRNA downstream 74308 12102336 ~ 12173554 (-) False XLOC_010495
TCONS_00020601 mRNA downstream 74463 12142148 ~ 12173399 (-) True XLOC_010495
TCONS_00020598 mRNA downstream 150304 12065218 ~ 12097558 (-) True XLOC_010494
TCONS_00020607 mRNA upstream 8607 12256527 ~ 12266153 (-) True XLOC_010501
TCONS_00020608 mRNA upstream 18446 12266366 ~ 12291045 (-) True XLOC_010502
TCONS_00020609 mRNA upstream 46364 12294284 ~ 12319822 (-) False XLOC_010503
TCONS_00020610 mRNA upstream 46369 12294289 ~ 12316979 (-) False XLOC_010503
TCONS_00020611 mRNA upstream 46369 12294289 ~ 12319822 (-) True XLOC_010503
TCONS_00020603 other downstream 8402 12239407 ~ 12239460 (-) True XLOC_010497
TCONS_00020591 other downstream 235674 12012074 ~ 12012188 (-) True XLOC_010492
TCONS_00020572 other downstream 468390 11760919 ~ 11779472 (-) False XLOC_010484
TCONS_00020567 other downstream 1331458 10916290 ~ 10916404 (-) True XLOC_010478
TCONS_00020565 other downstream 1410630 10829809 ~ 10837232 (-) False XLOC_010476
TCONS_00020605 other upstream 2348 12250268 ~ 12250323 (-) True XLOC_010499
TCONS_00020606 other upstream 5495 12253415 ~ 12253471 (-) True XLOC_010500
TCONS_00020613 other upstream 226941 12474861 ~ 12494417 (-) False XLOC_010505
TCONS_00020641 other upstream 1274379 13522299 ~ 13542460 (-) False XLOC_010519
TCONS_00020651 other upstream 1420246 13668166 ~ 13671219 (-) True XLOC_010526