RNA id: TCONS_00020665


Basic Information

Item Value
RNA id TCONS_00020665
length 418
RNA type processed_transcript
GC content 0.53
exon number 2
gene id XLOC_010535
representative True

Chromosome Information

Item Value
chromosome id NC_007127.7
NCBI id CM002900.2
chromosome length 55266484
location 13957756 ~ 13958885 (-)
genome version GRCz11_2017_zebrafish_Genome
species zebrafish
(Danio rerio)

Sequence

TGTTGCCCAGGTCACGCGCTTCTGCCGCTTTTTCAGGTTCAAAAGTGGCTTGACCTGGGGAATGTGGCACCTGTAGCCCATTTCCTGCACATGGCTGTACACGGTGGCTCTGGATGTTTCTACTCcagactcagTCCACTGCTTCCGCAGGTCCCCCAAGGTCTGGAGTCGGTCCTTCACTACAATCTTCCTCAGGGTCCGGTCATCTCTTCTCTTTGTGCGGCGTTTTCTGCCACACTTTTTCCTTCCCTCAGACTTCCCACTGAGGTGTCTTGATACAGCACTCTGGGAACAGAAATTCCTTTCTGTATCGTACCCTCTTGCTGGACGGTGTCAATGATGGCCTTCTGGACAGCAGTCAGTTCGGCAGTCTTACCCAGGATTGCGGTTTTGAGTAATGAACCAGGCTGGGAGTTTT

Function

GO: NA

KEGG: NA

Ensembl:

ensembl_id ENSDART00000134446

JBrowse2

Neighbor

RNA id RNA type direction distance location representative gene id
TCONS_00020659 lncRNA downstream 97192 13857672 ~ 13860564 (-) True XLOC_010530
TCONS_00020658 lncRNA downstream 97493 13857672 ~ 13860263 (-) False XLOC_010530
TCONS_00022131 lncRNA downstream 98444 13858907 ~ 13859312 (-) True XLOC_010531
TCONS_00020643 lncRNA downstream 393481 13556921 ~ 13564275 (-) True XLOC_010521
TCONS_00021788 lncRNA downstream 406429 13545293 ~ 13551327 (-) True XLOC_010520
TCONS_00022132 lncRNA upstream 17495 13976380 ~ 14005609 (-) True XLOC_010536
TCONS_00022133 lncRNA upstream 129446 14088331 ~ 14090702 (-) True XLOC_010539
TCONS_00020668 lncRNA upstream 134896 14093781 ~ 14167673 (-) True XLOC_010540
TCONS_00020675 lncRNA upstream 457461 14416346 ~ 14417407 (-) True XLOC_010544
TCONS_00020676 lncRNA upstream 462915 14421800 ~ 14428968 (-) False XLOC_010545
TCONS_00020663 mRNA downstream 36167 13911692 ~ 13921589 (-) True XLOC_010533
TCONS_00020660 mRNA downstream 76600 13875867 ~ 13881156 (-) False XLOC_010532
TCONS_00020662 mRNA downstream 76600 13876675 ~ 13881156 (-) True XLOC_010532
TCONS_00020661 mRNA downstream 76617 13876560 ~ 13881139 (-) False XLOC_010532
TCONS_00020655 mRNA downstream 139685 13810018 ~ 13818071 (-) False XLOC_010529
TCONS_00020666 mRNA upstream 28850 13987735 ~ 13992646 (-) True XLOC_010537
TCONS_00020667 mRNA upstream 105512 14064397 ~ 14074594 (-) True XLOC_010538
TCONS_00020669 mRNA upstream 272521 14231406 ~ 14248892 (-) True XLOC_010541
TCONS_00020671 mRNA upstream 317479 14276364 ~ 14332561 (-) False XLOC_010542
TCONS_00020670 mRNA upstream 317479 14276364 ~ 14332561 (-) False XLOC_010542
TCONS_00020657 other downstream 139816 13813970 ~ 13817940 (-) True XLOC_010529
TCONS_00020651 other downstream 286537 13668166 ~ 13671219 (-) True XLOC_010526
TCONS_00020641 other downstream 415296 13522299 ~ 13542460 (-) False XLOC_010519
TCONS_00020613 other downstream 1463339 12474861 ~ 12494417 (-) False XLOC_010505
TCONS_00020606 other downstream 1704285 12253415 ~ 12253471 (-) True XLOC_010500
TCONS_00020674 other upstream 426435 14385320 ~ 14396699 (-) True XLOC_010543
TCONS_00020689 other upstream 1854621 15813506 ~ 15814501 (-) True XLOC_010554
TCONS_00020706 other upstream 2614529 16573414 ~ 16573530 (-) True XLOC_010567
TCONS_00020716 other upstream 2718823 16677708 ~ 16692267 (-) True XLOC_010571
TCONS_00020722 other upstream 3161179 17120064 ~ 17120186 (-) True XLOC_010576

Expression Profile

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