RNA id: CI01000350_00249103_00250406.mRNA



Basic Information


Item Value
RNA id CI01000350_00249103_00250406.mRNA
length 1067
RNA type mRNA
GC content 0.42
exon number 3
gene id CI01000350_00249103_00250406
representative True

Chromosome Information


Item Value
chromosome id CI01000350
NCBI id null
chromosome length 2572209
location 249103 ~ 250628 (+)
genome version v1_2015/06_NatureGenetics_grasscarp_Genome
species grasscarp
(Ctenopharyngodon idella)

Sequence


GTGATTCTGTGCTCTATCTGAACTGGAGACCTGGAGAACCTGATGGCAGAGACGATTGTGCTATGATGATGAATGGACAGTGGCATGATCTGCCATGCAGTGATAAACGTCATTTCATCTGCAACAACACGAACACAGGACTCGTCTTTATCAATCAGACGATGAATTGGAGAGATGCTCAGAGTCACTGCAGACAGAATCACTCTGATCTGGTCAGTGTGAGGAACCAGAATGAGAGTCAACAGGTGGCAAAGGTCATTAGTGATAATAACAAATCTGGATCATGGGTCTGGATCGGTCTGTTCAGAGTCAGAGACTTATGGCAGTGGTCAGATCAGAGTAACTCCTCATTCAGATACTGGAAGTCTGGTGAACCCAGCTTGACTATACATGGTGAAAACTGTACAGTGGTTGAACCGAATGCTCTGGGACAATGGGCAGACGTTTCCTGCAAACAAACATTTCCTTTTGTCTGTCATGAAGATAAACTGATCCTGATCAAAGAGAATCTGACGTGGCCTGAAGCTCTGAGATACTGCAGACAGAATCATATGGATTTGGTCTCGGTTCATTCAGAAGAGATTCAGCGTGAGGTGATGAATGTGGTTAAACAGGCGTCTACTGAGGCGGTGTGGTTGGGTTTACACAACTACTGCAGCATGAACATGTGGATCTGGTTGAGCGGAGACATCGTGTGCTATCAGAACTGGGCTCCAGGGAACGGAACGACACCGGAAGAGTGCCGCCTCGAGAAGAGAAAAGGAGCAGTTCAGTCTGGAGGAGATCAGCGCTGGATCAGCCTTCCTGAAACTCGCAAACTCAACTTCATCTGCAGCAGATATTAAGAGTGAATGTTTGTGTGTTTACTTACATTCACTGCTTTCATTCTTCATTATTTCTCTTATTTACTTGTATTTGTTTTAGTAAGTCCTGAGTGAATCTGCTAACTGCTAAATTTTAATCATCATTACATAATGTAATCTTTTTTTTTTTTTTTTTTTTTTAAATTAACATTAATGTTTAATATTCTTTTGATGATGTTGGAAAGATAGGAAGAGCGTACTGCA

Function


GO: NA

KEGG: NA

JBrowse2


Neighbor


RNA id RNA type direction distance location representative gene id
TU580977 lncRNA upstream 18740 227019 ~ 230363 (+) True G506699
TU580967 lncRNA upstream 30409 218204 ~ 218694 (+) False G506694
TU580965 lncRNA upstream 30409 218338 ~ 218694 (+) True G506694
TU580964 lncRNA upstream 30442 218338 ~ 218661 (+) False G506694
TU580955 lncRNA upstream 43398 196725 ~ 205705 (+) True G506690
TU581001 lncRNA downstream 3922 254550 ~ 254601 (+) True G506714
TU581043 lncRNA downstream 123288 373916 ~ 374298 (+) True G506752
TU581051 lncRNA downstream 141083 391711 ~ 391925 (+) True G506760
TU581067 lncRNA downstream 224497 475125 ~ 562627 (+) True G506775
TU581133 lncRNA downstream 319648 570276 ~ 570843 (+) True G506807
CI01000350_00146107_00147209.mRNA mRNA upstream 101828 145916 ~ 147275 (+) True CI01000350_00146107_00147209
CI01000350_00140280_00143769.mRNA mRNA upstream 105299 140153 ~ 143804 (+) True CI01000350_00140280_00143769
CI01000350_00133984_00139525.mRNA mRNA upstream 109139 133984 ~ 139964 (+) True CI01000350_00133984_00139525
CI01000350_00110973_00120683.mRNA mRNA upstream 128420 108898 ~ 120683 (+) True CI01000350_00110973_00120683
CI01000350_00095230_00102190.mRNA mRNA upstream 146529 95230 ~ 102574 (+) True CI01000350_00095230_00102190
CI01000350_00260761_00261744.mRNA mRNA downstream 10001 260629 ~ 261809 (+) False CI01000350_00260761_00261744
CI01000350_00266537_00276376.mRNA mRNA downstream 14644 265272 ~ 276791 (+) True CI01000350_00266537_00276376
CI01000350_00277505_00278977.mRNA mRNA downstream 26545 277173 ~ 279752 (+) True CI01000350_00277505_00278977
CI01000350_00299478_00304914.mRNA mRNA downstream 48634 299262 ~ 305567 (+) True CI01000350_00299478_00304914
CI01000350_00324715_00343520.mRNA mRNA downstream 74087 324715 ~ 344278 (+) True CI01000350_00324715_00343520
TU581079 other downstream 248468 499096 ~ 500756 (+) True G506786
TU581251 other downstream 514682 765310 ~ 766111 (+) True G506911
TU581186 other downstream 727463 978091 ~ 978891 (+) True G506858
TU582195 other downstream 1203935 1455782 ~ 1455902 (+) False G507676
TU582194 other downstream 1204258 1455782 ~ 1455902 (+) False G507676

Expression Profile