RNA id: CI01000350_00361432_00364007.mRNA



Basic Information


Item Value
RNA id CI01000350_00361432_00364007.mRNA
length 596
RNA type mRNA
GC content 0.46
exon number 4
gene id CI01000350_00361432_00364007
representative True

Chromosome Information


Item Value
chromosome id CI01000350
NCBI id null
chromosome length 2572209
location 361432 ~ 364078 (+)
genome version v1_2015/06_NatureGenetics_grasscarp_Genome
species grasscarp
(Ctenopharyngodon idella)

Sequence


GGATGTCCAAACTACGGCCCACGGGCCAACTGCGGCCGGGGGATGAATTTTAAGCGGCCTGCAGCTTCTCTACTAAAATATATTATGTGTGGCAAGGGAAACAAAAAGCGCACCAAAAGCGGAACGAAACAGCGCTACTTGTGCGCACTGCACGACTCACAAGCTCACAAATGTGTTTACTTGCTGAGTGTCTCGATCACACGACCACTAAACAGCCAACGAGATGTGTTCAAGTTCGGCGTAGAGGTCTCAGGCCATTCAGCAAAGTATGGGAACTACACCATGATGGATCTTCAACACAACCTCATATTAGACATCCAGCTAGTGCAGAGTAATGAGATTGGTGTGAGCTACCATATGGAGAAAGAGGGATTAAAAAGAAGCCTGGAATGGTTGGAAGAACAAGGTGTAAGGCTGGACTGCATTGTAACAGACTGCCATCCACAGATTCAAAAATTTCTGAAAGAACAAAACATCACACAGTATGATGTCTGGCATTTGGAGAAAGGCTGTGTGGTTGGCTAGGCATCTCTGGTGTTGTGTTTGACTGGTTTAAATCCTATCTCTCTGATCGTTTCCAGTTTGTCTCTCTGGCA

Function


GO: NA

KEGG: NA

JBrowse2


Neighbor


RNA id RNA type direction distance location representative gene id
TU580983 lncRNA upstream 12278 242446 ~ 349154 (+) True G506704
TU581001 lncRNA upstream 100559 254550 ~ 254601 (+) True G506714
TU580977 lncRNA upstream 131069 227019 ~ 230363 (+) True G506699
TU580967 lncRNA upstream 142738 218204 ~ 218694 (+) False G506694
TU581043 lncRNA downstream 9838 373916 ~ 374298 (+) True G506752
TU581051 lncRNA downstream 27633 391711 ~ 391925 (+) True G506760
TU581067 lncRNA downstream 111047 475125 ~ 562627 (+) True G506775
TU581133 lncRNA downstream 206198 570276 ~ 570843 (+) True G506807
TU581129 lncRNA downstream 207084 571162 ~ 571997 (+) False G506804
CI01000350_00324715_00343520.mRNA mRNA upstream 17154 324715 ~ 344278 (+) True CI01000350_00324715_00343520
CI01000350_00299478_00304914.mRNA mRNA upstream 55865 299262 ~ 305567 (+) True CI01000350_00299478_00304914
CI01000350_00277505_00278977.mRNA mRNA upstream 81680 277173 ~ 279752 (+) True CI01000350_00277505_00278977
CI01000350_00266537_00276376.mRNA mRNA upstream 84641 265272 ~ 276791 (+) True CI01000350_00266537_00276376
CI01000350_00260761_00261744.mRNA mRNA upstream 99623 260629 ~ 261809 (+) False CI01000350_00260761_00261744
CI01000350_00457534_00503845.mRNA mRNA downstream 92979 457057 ~ 503965 (+) True CI01000350_00457534_00503845
CI01000350_00586494_00587461.mRNA mRNA downstream 222416 586494 ~ 587683 (+) True CI01000350_00586494_00587461
CI01000350_00825304_00827619.mRNA mRNA downstream 461226 825304 ~ 827675 (+) True CI01000350_00825304_00827619
CI01000350_00856394_00860868.mRNA mRNA downstream 492316 856394 ~ 861076 (+) True CI01000350_00856394_00860868
CI01000350_00887155_00896486.mRNA mRNA downstream 523039 887117 ~ 898009 (+) True CI01000350_00887155_00896486
TU581079 other downstream 135018 499096 ~ 500756 (+) True G506786
TU581251 other downstream 401232 765310 ~ 766111 (+) True G506911
TU581186 other downstream 614013 978091 ~ 978891 (+) True G506858
TU582195 other downstream 1090485 1455782 ~ 1455902 (+) False G507676
TU582194 other downstream 1090808 1455782 ~ 1455902 (+) False G507676

Expression Profile