RNA id: TU582195



Basic Information


Item Value
RNA id TU582195
length 121
RNA type TUCP
GC content 0.44
exon number 1
gene id G507676
representative False

Chromosome Information


Item Value
chromosome id CI01000350
NCBI id null
chromosome length 2572209
location 1455782 ~ 1456034 (+)
genome version v1_2015/06_NatureGenetics_grasscarp_Genome
species grasscarp
(Ctenopharyngodon idella)

Sequence


TGTTTTTTTCATTTTTATTTGTAGTAAAACCATTGCTAATTTTCCATCATTTAGTTAGCTTGAATCTTTGTTTCAATGAATTTGTTTGGATAACACTTTAGTATAGGCAACTTGTATTCATTATTAACTACAACTTTTCCCTTAAAAAACTCCTTATTTACTGCTTATTACTAGTCAGTAAATTAGTTGTTATGTTTAGGTATTAGGTAGGATAAAGAATGTAGAATATGGTCATGCAGAATAAGACATTAATATGTGCTTAATAATTACTAACAGTCAATATTGTAGTAATATGCATGCTGAAAAGCAACTAGTGGATGGCGAGGTTGAGGGCTTTTGCCAGCTCTGGAGTTTGGCCATCTGGAGGAGGAAATAGACCATCCCCAAGGCAGCGGAAGTGGTACGACCTCTATCAGAAGATTGAGAAATGCCCCATGCAGGCCCATGGACAGACAACCCTCTTTGGAGGGTCCATGGCCTGCAACTGTGGATTCCATACCACTAAGCCTGCCACTGCCGCTTCAACTTCTGCCGCACCTCCGCAGTCTGAAGCTTCAGACACAGCCCCTGCCCCAGCCCCACGGACATTCCTGAGGCCCCCTCCAAGTTTGTCAATGTTCACTAAGTCACGGTTTGGTGGGTCCCAGTTGGCTTCAATAAAGCCAAATTTAGTGGATCGAAGGAGCCCCAGCCCCTCTCCTCCACCCTCTTCAAGAACCCCCAGCCCTTCTCCTCCCA

Function


GO: NA

KEGG: NA

JBrowse2


Neighbor


RNA id RNA type direction distance location representative gene id
TU582191 lncRNA upstream 25538 1428685 ~ 1429025 (+) True G507673
TU582190 lncRNA upstream 26303 1428042 ~ 1428260 (+) True G507672
TU582173 lncRNA upstream 54033 1400285 ~ 1400530 (+) True G507656
TU581522 lncRNA upstream 98348 1353420 ~ 1353878 (+) True G507144
TU581500 lncRNA upstream 141537 1306298 ~ 1313026 (+) True G507123
TU582204 lncRNA downstream 2173 1458862 ~ 1458971 (+) True G507683
TU582222 lncRNA downstream 39508 1495410 ~ 1558319 (+) True G507700
TU582220 lncRNA downstream 108764 1564666 ~ 1565610 (+) True G507698
TU582219 lncRNA downstream 119004 1574906 ~ 1595941 (+) True G507697
TU582370 lncRNA downstream 192827 1648729 ~ 1648957 (+) True G507843
CI01000350_01374131_01407038.mRNA mRNA upstream 47525 1373797 ~ 1407038 (+) True CI01000350_01374131_01407038
CI01000350_01357162_01358608.mRNA mRNA upstream 95917 1356360 ~ 1358646 (+) True CI01000350_01357162_01358608
CI01000350_01343443_01355860.mRNA mRNA upstream 98678 1343102 ~ 1355885 (+) False CI01000350_01343443_01355860
CI01000350_01315313_01317803.mRNA mRNA upstream 136340 1315269 ~ 1318223 (+) True CI01000350_01315313_01317803
CI01000350_01289098_01292899.mRNA mRNA upstream 161484 1289098 ~ 1293079 (+) True CI01000350_01289098_01292899
CI01000350_01583582_01585575.mRNA mRNA downstream 127581 1583483 ~ 1585964 (+) True CI01000350_01583582_01585575
CI01000350_01625265_01628425.mRNA mRNA downstream 169241 1625143 ~ 1628624 (+) True CI01000350_01625265_01628425
CI01000350_01748423_01750654.mRNA mRNA downstream 292521 1748423 ~ 1751056 (+) True CI01000350_01748423_01750654
CI01000350_01860321_01869386.mRNA mRNA downstream 403997 1859899 ~ 1870119 (+) True CI01000350_01860321_01869386
CI01000350_02051537_02098878.mRNA mRNA downstream 595635 2051537 ~ 2099018 (+) True CI01000350_02051537_02098878
TU581186 other upstream 475672 978091 ~ 978891 (+) True G506858
TU581251 other upstream 688452 765310 ~ 766111 (+) True G506911
TU581079 other upstream 953807 499096 ~ 500756 (+) True G506786
TU582206 other downstream 3924 1459826 ~ 1462015 (+) False CI01000350_01454880_01462490
TU582205 other downstream 5217 1461119 ~ 1462237 (+) True CI01000350_01454880_01462490
TU582221 other downstream 59807 1515709 ~ 1519828 (+) True G507699
TU582500 other downstream 931721 2390180 ~ 2390292 (+) True G507957

Expression Profile