RNA id: TCONS_00020681


Basic Information

Item Value
RNA id TCONS_00020681
length 719
RNA type mRNA
GC content 0.41
exon number 2
gene id XLOC_010546
representative False

Chromosome Information

Item Value
chromosome id NC_007127.7
NCBI id CM002900.2
chromosome length 55266484
location 14528374 ~ 14552199 (-)
genome version GRCz11_2017_zebrafish_Genome
species zebrafish
(Danio rerio)

Sequence

GATTGAATACTTTTCATCATATgATACTAAAGATGCTGTCATTGATGGTCATCTTGGCTCTCACACTTCACACTGGTCTGTGTGAGCTGGACATGCAGCACCCAAATATGCCCTGCACTCCAGCAAAAAATGTGAATGCTTACAACTCTTTTCTCAAAAAACACATTCGTGACGACCTTCCCACTGATCTGAAGAAAGACAACTGGAAAAAGTTCATCAACAGAATTGACACCTGGGACAGGCCAGTTCAGTCCTTTTTCCCtttgagtttaaaaaataatttgacaaATGTGTGTTCATCAGGAGGAAAGATGTACCAGGGCAACCTCTGCATCAGCAAGACACCCTTTTCCTTCATCACAGTGAAGATCGACTGTGCGACTAAAACAATCAAAAGAGTGGAACGTCGTGAGAACTATGTTATTCTTGCATGTGATAGATTTGGCAACAAATGCCTCCCTGACCACTTTGAAGCAAACACCAAAAACATTCAACCAAATACCAAAAAGCCGAACTGCAATAAATCCTGGCTTGTGTCTGTTTATGAGGAAGCATTTGCCTGGCTGTGATGTACTAAAATATTAACcagcaaaacaattttttttttttttcagaatcacTGTATTGTTTTTTAGCAACATCTATaatgccaacccaggctcattctgaaaacgcagtgccgtggacgtttctggagaccgcaaaatacatcccgggag

Function

GO: NA

KEGG: NA

Ensembl:

ensembl_id ENSDART00000148126

JBrowse2

Neighbor

RNA id RNA type direction distance location representative gene id
TCONS_00020680 lncRNA downstream 84985 14431515 ~ 14443389 (-) False XLOC_010545
TCONS_00021791 lncRNA downstream 85177 14436274 ~ 14443197 (-) True XLOC_010545
TCONS_00020679 lncRNA downstream 89490 14431515 ~ 14438884 (-) False XLOC_010545
TCONS_00020678 lncRNA downstream 94717 14431515 ~ 14433657 (-) False XLOC_010545
TCONS_00021790 lncRNA downstream 94718 14426860 ~ 14433656 (-) False XLOC_010545
TCONS_00020687 lncRNA upstream 1173480 15708204 ~ 15709144 (-) True XLOC_010551
TCONS_00020688 lncRNA upstream 1244435 15779159 ~ 15780407 (-) True XLOC_010552
TCONS_00021792 lncRNA upstream 1251513 15786237 ~ 15786804 (-) True XLOC_010553
TCONS_00022134 lncRNA upstream 1731832 16266556 ~ 16270435 (-) True XLOC_010562
TCONS_00020702 lncRNA upstream 1930470 16465194 ~ 16470842 (-) True XLOC_010564
TCONS_00020673 mRNA downstream 131371 14383479 ~ 14397003 (-) False XLOC_010543
TCONS_00020672 mRNA downstream 174807 14280496 ~ 14353567 (-) True XLOC_010542
TCONS_00020671 mRNA downstream 195813 14276364 ~ 14332561 (-) False XLOC_010542
TCONS_00020670 mRNA downstream 195813 14276364 ~ 14332561 (-) False XLOC_010542
TCONS_00020669 mRNA downstream 279482 14231406 ~ 14248892 (-) True XLOC_010541
TCONS_00020683 mRNA upstream 37284 14572008 ~ 14587332 (-) True XLOC_010547
TCONS_00020684 mRNA upstream 517789 15052513 ~ 15097513 (-) True XLOC_010548
TCONS_00020685 mRNA upstream 630259 15164983 ~ 15263099 (-) True XLOC_010549
TCONS_00020686 mRNA upstream 834910 15369634 ~ 15387459 (-) True XLOC_010550
TCONS_00020690 mRNA upstream 1408163 15942887 ~ 15988320 (-) True XLOC_010555
TCONS_00020674 other downstream 131675 14385320 ~ 14396699 (-) True XLOC_010543
TCONS_00020665 other downstream 569489 13957756 ~ 13958885 (-) True XLOC_010535
TCONS_00020657 other downstream 710434 13813970 ~ 13817940 (-) True XLOC_010529
TCONS_00020651 other downstream 857155 13668166 ~ 13671219 (-) True XLOC_010526
TCONS_00020641 other downstream 985914 13522299 ~ 13542460 (-) False XLOC_010519
TCONS_00020689 other upstream 1278782 15813506 ~ 15814501 (-) True XLOC_010554
TCONS_00020706 other upstream 2038690 16573414 ~ 16573530 (-) True XLOC_010567
TCONS_00020716 other upstream 2142984 16677708 ~ 16692267 (-) True XLOC_010571
TCONS_00020722 other upstream 2585340 17120064 ~ 17120186 (-) True XLOC_010576
TCONS_00020724 other upstream 2587274 17121998 ~ 17129466 (-) False XLOC_010577

Expression Profile

//