RNA id: TCONS_00020689


Basic Information

Item Value
RNA id TCONS_00020689
length 195
RNA type processed_transcript
GC content 0.52
exon number 2
gene id XLOC_010554
representative True

Chromosome Information

Item Value
chromosome id NC_007127.7
NCBI id CM002900.2
chromosome length 55266484
location 15813506 ~ 15814501 (-)
genome version GRCz11_2017_zebrafish_Genome
species zebrafish
(Danio rerio)

Sequence

GTGTGATGAAAGATAATGTGTGGAAGTGTGCTGAAAGGCAAGGTAAAGGCCGCACAGGGGAAGGCTGCTGAGAGACCACTGTACAGTCTGAGGCCTGGCAAATTTCGTGGTGATCAGGGACCTGAGGAGAAAGAGCTGGAGAGCAAAGCGCTGGTTGGGTCCATTTCAAGTGCTACTGACCACTGAGACATCGGT

Function

GO: NA

KEGG: NA

Ensembl:

ensembl_id ENSDART00000160496

JBrowse2

Neighbor

RNA id RNA type direction distance location representative gene id
TCONS_00021792 lncRNA downstream 26702 15786237 ~ 15786804 (-) True XLOC_010553
TCONS_00020688 lncRNA downstream 33099 15779159 ~ 15780407 (-) True XLOC_010552
TCONS_00020687 lncRNA downstream 104362 15708204 ~ 15709144 (-) True XLOC_010551
TCONS_00020680 lncRNA downstream 1370117 14431515 ~ 14443389 (-) False XLOC_010545
TCONS_00021791 lncRNA downstream 1370309 14436274 ~ 14443197 (-) True XLOC_010545
TCONS_00022134 lncRNA upstream 452055 16266556 ~ 16270435 (-) True XLOC_010562
TCONS_00020702 lncRNA upstream 650693 16465194 ~ 16470842 (-) True XLOC_010564
TCONS_00020703 lncRNA upstream 712474 16526975 ~ 16529972 (-) True XLOC_010565
TCONS_00022135 lncRNA upstream 771594 16586095 ~ 16590468 (-) True XLOC_010566
TCONS_00020707 lncRNA upstream 778848 16593349 ~ 16604080 (-) True XLOC_010568
TCONS_00020686 mRNA downstream 426047 15369634 ~ 15387459 (-) True XLOC_010550
TCONS_00020685 mRNA downstream 550407 15164983 ~ 15263099 (-) True XLOC_010549
TCONS_00020684 mRNA downstream 715993 15052513 ~ 15097513 (-) True XLOC_010548
TCONS_00020683 mRNA downstream 1226174 14572008 ~ 14587332 (-) True XLOC_010547
TCONS_00020682 mRNA downstream 1261307 14528556 ~ 14552199 (-) True XLOC_010546
TCONS_00020690 mRNA upstream 128386 15942887 ~ 15988320 (-) True XLOC_010555
TCONS_00020691 mRNA upstream 227142 16041643 ~ 16120941 (-) True XLOC_010556
TCONS_00020692 mRNA upstream 334260 16148761 ~ 16152199 (-) True XLOC_010557
TCONS_00020693 mRNA upstream 350528 16165029 ~ 16182319 (-) True XLOC_010558
TCONS_00020694 mRNA upstream 395707 16210208 ~ 16212615 (-) True XLOC_010559
TCONS_00020674 other downstream 1416807 14385320 ~ 14396699 (-) True XLOC_010543
TCONS_00020665 other downstream 1854621 13957756 ~ 13958885 (-) True XLOC_010535
TCONS_00020657 other downstream 1995566 13813970 ~ 13817940 (-) True XLOC_010529
TCONS_00020651 other downstream 2142287 13668166 ~ 13671219 (-) True XLOC_010526
TCONS_00020641 other downstream 2271046 13522299 ~ 13542460 (-) False XLOC_010519
TCONS_00020706 other upstream 758913 16573414 ~ 16573530 (-) True XLOC_010567
TCONS_00020716 other upstream 863207 16677708 ~ 16692267 (-) True XLOC_010571
TCONS_00020722 other upstream 1305563 17120064 ~ 17120186 (-) True XLOC_010576
TCONS_00020724 other upstream 1307497 17121998 ~ 17129466 (-) False XLOC_010577
TCONS_00020737 other upstream 1430407 17244908 ~ 17245047 (-) True XLOC_010582

Expression Profile

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