RNA id: TCONS_00020737


Basic Information

Item Value
RNA id TCONS_00020737
length 140
RNA type snoRNA
GC content 0.43
exon number 1
gene id XLOC_010582
representative True

Chromosome Information

Item Value
chromosome id NC_007127.7
NCBI id CM002900.2
chromosome length 55266484
location 17244908 ~ 17245047 (-)
genome version GRCz11_2017_zebrafish_Genome
species zebrafish
(Danio rerio)

Sequence

CTTCCTGTTTTAGTACCACCCATCTGCTTTTTTTCAAGGTGTGTGGCTATGCTAACAGGATAAAGGAACTCTGTCAAGATCTGAAGAGGTGGTTGGCTACACCCCCTCCACTTCTATATGAATTGGCAGTACATTTATGT

Function

GO: NA

KEGG: NA

Ensembl:

ensembl_id ENSDART00000119242

JBrowse2

Neighbor

RNA id RNA type direction distance location representative gene id
TCONS_00020736 lncRNA downstream 4070 17235282 ~ 17240838 (-) True XLOC_010581
TCONS_00020732 lncRNA downstream 47307 17194073 ~ 17197601 (-) False XLOC_010579
TCONS_00022136 lncRNA downstream 212097 17015188 ~ 17032811 (-) True XLOC_010573
TCONS_00020715 lncRNA downstream 578151 16665854 ~ 16666757 (-) False XLOC_010571
TCONS_00020707 lncRNA downstream 640828 16593349 ~ 16604080 (-) True XLOC_010568
TCONS_00021793 lncRNA upstream 434056 17679103 ~ 17681952 (-) True XLOC_010591
TCONS_00022137 lncRNA upstream 459783 17704830 ~ 17706576 (-) False XLOC_010592
TCONS_00020756 lncRNA upstream 459783 17704830 ~ 17706764 (-) False XLOC_010592
TCONS_00022138 lncRNA upstream 578400 17823447 ~ 17824848 (-) True XLOC_010594
TCONS_00022139 lncRNA upstream 892595 18137642 ~ 18140068 (-) True XLOC_010595
TCONS_00020734 mRNA downstream 37154 17204251 ~ 17207754 (-) True XLOC_010580
TCONS_00020731 mRNA downstream 44788 17193990 ~ 17200120 (-) False XLOC_010579
TCONS_00020728 mRNA downstream 47239 17189839 ~ 17197669 (-) False XLOC_010579
TCONS_00020729 mRNA downstream 47283 17192664 ~ 17197625 (-) False XLOC_010579
TCONS_00020733 mRNA downstream 47343 17195185 ~ 17197565 (-) True XLOC_010579
TCONS_00020739 mRNA upstream 9442 17254489 ~ 17258111 (-) True XLOC_010584
TCONS_00020740 mRNA upstream 17980 17263027 ~ 17300030 (-) True XLOC_010585
TCONS_00020741 mRNA upstream 57405 17302452 ~ 17316440 (-) False XLOC_010586
TCONS_00020742 mRNA upstream 57405 17302452 ~ 17345377 (-) False XLOC_010586
TCONS_00020743 mRNA upstream 57405 17302452 ~ 17347727 (-) True XLOC_010586
TCONS_00020724 other downstream 115442 17121998 ~ 17129466 (-) False XLOC_010577
TCONS_00020722 other downstream 124722 17120064 ~ 17120186 (-) True XLOC_010576
TCONS_00020716 other downstream 552641 16677708 ~ 16692267 (-) True XLOC_010571
TCONS_00020706 other downstream 671378 16573414 ~ 16573530 (-) True XLOC_010567
TCONS_00020689 other downstream 1430407 15813506 ~ 15814501 (-) True XLOC_010554
TCONS_00020738 other upstream 2175 17247222 ~ 17247363 (-) True XLOC_010583
TCONS_00020757 other upstream 460851 17705898 ~ 17705987 (-) True XLOC_010592
TCONS_00020761 other upstream 1123867 18368914 ~ 18372540 (-) True XLOC_010597
TCONS_00020762 other upstream 1250493 18495540 ~ 18501141 (-) False XLOC_010598
TCONS_00020763 other upstream 1252248 18497295 ~ 18501141 (-) False XLOC_010598

Expression Profile

//