RNA id: TCONS_00020738


Basic Information

Item Value
RNA id TCONS_00020738
length 142
RNA type snoRNA
GC content 0.42
exon number 1
gene id XLOC_010583
representative True

Chromosome Information

Item Value
chromosome id NC_007127.7
NCBI id CM002900.2
chromosome length 55266484
location 17247222 ~ 17247363 (-)
genome version GRCz11_2017_zebrafish_Genome
species zebrafish
(Danio rerio)

Sequence

CTTCCTGTTTTAGCACCATCCACTTGCTTCCTCAAAAGGTGTGTGGCTATGCCAACAGGAGAAAGAAAATGTCTGTCATAATCTGAAGTGGTGGATGGTCACACTTTCTCCACCTCTATATGAATTGACAGTACATTTCTCT

Function

GO: NA

KEGG: NA

Ensembl:

ensembl_id ENSDART00000119849

JBrowse2

Neighbor

RNA id RNA type direction distance location representative gene id
TCONS_00020736 lncRNA downstream 6384 17235282 ~ 17240838 (-) True XLOC_010581
TCONS_00020732 lncRNA downstream 49621 17194073 ~ 17197601 (-) False XLOC_010579
TCONS_00022136 lncRNA downstream 214411 17015188 ~ 17032811 (-) True XLOC_010573
TCONS_00020715 lncRNA downstream 580465 16665854 ~ 16666757 (-) False XLOC_010571
TCONS_00020707 lncRNA downstream 643142 16593349 ~ 16604080 (-) True XLOC_010568
TCONS_00021793 lncRNA upstream 431740 17679103 ~ 17681952 (-) True XLOC_010591
TCONS_00022137 lncRNA upstream 457467 17704830 ~ 17706576 (-) False XLOC_010592
TCONS_00020756 lncRNA upstream 457467 17704830 ~ 17706764 (-) False XLOC_010592
TCONS_00022138 lncRNA upstream 576084 17823447 ~ 17824848 (-) True XLOC_010594
TCONS_00022139 lncRNA upstream 890279 18137642 ~ 18140068 (-) True XLOC_010595
TCONS_00020734 mRNA downstream 39468 17204251 ~ 17207754 (-) True XLOC_010580
TCONS_00020731 mRNA downstream 47102 17193990 ~ 17200120 (-) False XLOC_010579
TCONS_00020729 mRNA downstream 49597 17192664 ~ 17197625 (-) False XLOC_010579
TCONS_00020739 mRNA upstream 7126 17254489 ~ 17258111 (-) True XLOC_010584
TCONS_00020740 mRNA upstream 15664 17263027 ~ 17300030 (-) True XLOC_010585
TCONS_00020741 mRNA upstream 55089 17302452 ~ 17316440 (-) False XLOC_010586
TCONS_00020742 mRNA upstream 55089 17302452 ~ 17345377 (-) False XLOC_010586
TCONS_00020743 mRNA upstream 55089 17302452 ~ 17347727 (-) True XLOC_010586
TCONS_00020737 other downstream 2175 17244908 ~ 17245047 (-) True XLOC_010582
TCONS_00020724 other downstream 117756 17121998 ~ 17129466 (-) False XLOC_010577
TCONS_00020722 other downstream 127036 17120064 ~ 17120186 (-) True XLOC_010576
TCONS_00020716 other downstream 554955 16677708 ~ 16692267 (-) True XLOC_010571
TCONS_00020706 other downstream 673692 16573414 ~ 16573530 (-) True XLOC_010567
TCONS_00020757 other upstream 458535 17705898 ~ 17705987 (-) True XLOC_010592
TCONS_00020761 other upstream 1121551 18368914 ~ 18372540 (-) True XLOC_010597
TCONS_00020762 other upstream 1248177 18495540 ~ 18501141 (-) False XLOC_010598
TCONS_00020763 other upstream 1249932 18497295 ~ 18501141 (-) False XLOC_010598
TCONS_00020764 other upstream 1250191 18497554 ~ 18501117 (-) True XLOC_010598

Expression Profile

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