RNA id: TCONS_00020773


Basic Information

Item Value
RNA id TCONS_00020773
length 810
RNA type mRNA
GC content 0.45
exon number 6
gene id XLOC_010603
representative True

Chromosome Information

Item Value
chromosome id NC_007127.7
NCBI id CM002900.2
chromosome length 55266484
location 19025023 ~ 19026733 (-)
genome version GRCz11_2017_zebrafish_Genome
species zebrafish
(Danio rerio)

Sequence

ATGACAAGTCAGGtcaTCAATTCTTGCCACTATCTGATCGATGACATGCTGGGTGAAGGATCCTTTGGAACTGTGTACAAGGGGCGACGTCTACACGATGACTTTAAGgtGGCAGTGAAATTTGTCACAAAGACGGAAGATGTGGAATACATATGTATCTCGGGTTATTCAGAGCCCCTTCCTCTTGAAGTTGCACTTCTCATCCTCGCCCATGGAGTATCCAACGTTCCAGAAATAATACAGCTTCTGGACTGGCAGGACCAGGAAGACCATTATATAATGGTGTTGGAATACCCTTCACCCTGTGAGGACCTATTTGCTTTCACAGAAAGCTATGGAGGATCCATAAGTGAAGGTTTAGCGCAAGTTGTTATGCAGCAGGCAACTCAAGCTGCATACATGTGCTGCCGCCATGGTGTTCTACATCGCGATATCAAACTTGAAAATCTACTGATCAACAAAGAGACTCATAAAGTCAAATTAATAGACTTTGGGTGTGGGGACCTTCTCAAGAAATTACCCTACGATACATTTGCCGGCACCCTTGAGTACTGCCCCCCAGAGTTTGAGGAAACGGGTGAATACAATGGGAAGCCGGCAACTGTCTGGTCCCTTGGCATCCTCTTGTTCGTATTGGTGTGTGGGGACTTTCCCAACACTCAAGAACTGCAAATGATCAATGAGAACAACTACTCCAAAGCTGGCTTGTCCAATGAATGTTGTCAGTTGATTAGTTGCTGTCTCCAGCAAAAGCCTGAGCAGCGGATTAAATTAAGAGAGATTCTTCTCCACGAATGGTTCAAGGTATGA

Function

GO: NA

KEGG: NA

Ensembl:

ensembl_id ENSDART00000104826

JBrowse2

Neighbor

RNA id RNA type direction distance location representative gene id
TCONS_00020770 lncRNA downstream 64655 18896967 ~ 18960586 (-) False XLOC_010601
TCONS_00021795 lncRNA downstream 524110 18495694 ~ 18501131 (-) False XLOC_010598
TCONS_00022140 lncRNA downstream 524124 18472943 ~ 18501117 (-) False XLOC_010598
TCONS_00020759 lncRNA downstream 875235 18145893 ~ 18150006 (-) False XLOC_010596
TCONS_00020774 lncRNA upstream 118414 19145147 ~ 19150743 (-) True XLOC_010604
TCONS_00021796 lncRNA upstream 469011 19495744 ~ 19497804 (-) True XLOC_010608
TCONS_00020782 lncRNA upstream 590355 19617088 ~ 19618074 (-) False XLOC_010610
TCONS_00020783 lncRNA upstream 590355 19617088 ~ 19618599 (-) True XLOC_010610
TCONS_00020784 lncRNA upstream 599793 19626526 ~ 19627832 (-) True XLOC_010611
TCONS_00020771 mRNA downstream 64628 18959353 ~ 18960613 (-) True XLOC_010601
TCONS_00020768 mRNA downstream 64908 18694830 ~ 18960333 (-) False XLOC_010601
TCONS_00020767 mRNA downstream 322992 18689930 ~ 18702249 (-) False XLOC_010601
TCONS_00020766 mRNA downstream 372595 18608978 ~ 18652646 (-) True XLOC_010600
TCONS_00020758 mRNA downstream 1311382 17711215 ~ 17713859 (-) True XLOC_010593
TCONS_00020775 mRNA upstream 154430 19181163 ~ 19254323 (-) False XLOC_010605
TCONS_00020776 mRNA upstream 155979 19182712 ~ 19349318 (-) False XLOC_010605
TCONS_00020778 mRNA upstream 279789 19306522 ~ 19373310 (-) True XLOC_010605
TCONS_00020780 mRNA upstream 510305 19537038 ~ 19568795 (-) False XLOC_010609
TCONS_00020781 mRNA upstream 513784 19540517 ~ 19568388 (-) True XLOC_010609
TCONS_00020769 other downstream 160855 18864270 ~ 18864386 (-) True XLOC_010602
TCONS_00020765 other downstream 441903 18580724 ~ 18583338 (-) True XLOC_010599
TCONS_00020762 other downstream 524100 18495540 ~ 18501141 (-) False XLOC_010598
TCONS_00020777 other upstream 163781 19190514 ~ 19190631 (-) True XLOC_010606
TCONS_00020779 other upstream 395562 19422295 ~ 19424133 (-) True XLOC_010607
TCONS_00020792 other upstream 849537 19876270 ~ 19882947 (-) False XLOC_010616
TCONS_00020793 other upstream 852111 19878844 ~ 19970367 (-) True XLOC_010616
TCONS_00020802 other upstream 1366960 20393693 ~ 20393809 (-) True XLOC_010623

Expression Profile

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