RNA id: TCONS_00020775


Basic Information

Item Value
RNA id TCONS_00020775
length 6229
RNA type mRNA
GC content 0.47
exon number 29
gene id XLOC_010605
representative False

Chromosome Information

Item Value
chromosome id NC_007127.7
NCBI id CM002900.2
chromosome length 55266484
location 19181163 ~ 19373310 (-)
genome version GRCz11_2017_zebrafish_Genome
species zebrafish
(Danio rerio)

Sequence

TTGAGTGAAGAGGAGGTGGAAGGTGTCAGGAAAGCAGTGAAGAGTGAAGTGCGGGATCTAGGTCTGCTGGACAACAACGAAAACTGCTGGAGGTTCTTTATGAATCGAGTGCGACATCAGCTCAAGGTCGTGCTATGCATGTCTCCAGTTGGTAATGCTCTGCGCCTGCGTGTCCGGCGTTTCCCGGCTCTGCTGAGCTGCACCACTCTGGACTGGTTCCAGGAATGGCCCCAGGAGGCTCTTCAGTCTGTCAGCTTAAAGTACCTGCAGGAAATCCCAAGTATTGAGCCGACCATTTGGGAATCCATCAGTCTTTTCATGGCCCACGCGCACACCAGCGTCAAGCGGGTTAGCGAGCGTTACTGCTGCAACGAGAAGAGGCACAACTACAGCACATCTAAGAGCTTCCTGGAGCAGCTGAGGCTTTACAAGAGTCTACTGGAAAACAGGGAGAAGGAACTGCATCAGAGACTTGACAGGCTTCAGTCTGGCCTTCAGAAAATCAAGAGTACTGCTTCTCAGGTGGAGGATCTGACAGTAAAGCTGAACTCTCAGGAAGTGGAGCTGACAATGAAGAACCAGGCAGCTGAGGCTCTTATGGCCAGAATTGGCCTGCAGACAGAGAGAGTGAGCCAGAAGAGAGAAGACGCAGACCTGGAGGAGCAGAAGgtggcTGCTATGCAAGCAGAGGTGTCCCGAAGACTAAAAGAATGTGAAAAGGATTTGGCTAAAGCTGAACCTGCTTTAGATGCAGCTACAGCTGCTCTCCAAACACTCAACAAGGTAAATCTGACAGAGTTAAAGACGTTCCCGAATCCCCCGGAGGCTGTGATTAACGTCACAGCGGCTGTGATGGTTCTTTTGGCTCCACGTGGGCAAATTCCTAAAGACCGGGGGTGGAAGGCTGCCAGAGTCTTCATGGGCAAGGTGGATGACTTTCTGCAGGCTCTTCTTTCTTACGATAAAGAGCACATCCCTCAGTCGTGTCTGAATGTGGTAAAGCAAGAATACCTTAAAAATCCAGAGTTTCATCCCGATCACGTCCGGACCAAGTCCTATGCAGCTGCAGGTCTCTGTGCCTGGATCATCAACATTGTGCGCTACTATGAGGTTTATTGTGAGGTTGCACCGAAACGTCTGGCTCTGGCACAAGCCAACAGTGAACTAGAAACTGCTACCACAAAACTCCTCAGCGTTCGAAGGAAACTGGAAGATCTGGACCGGCACCTGCAAAGCCTAACAGCTCAGTTTGAGAGGGCAGCGACTGAGAAACTGCGCTGCCAGGAGGAAGTGACTCGCACCAGCCAGACTATTAAACTGGCCAATCGGCTGGTGGGAGGCCTGCAGGCAGAAAATGTGCGCTGGTCGGAGGGTCAGCTGGAGCTGGAGGGTCAGCTGAAGACTGTGTGTGGTGATGTGCTCATAGCAGCTGCTTTTGTCTCCTACGCTGGATATTTCACACAGCCATATCGCCATCAGCTCCTTCACGACATGCTGATTCCTTTCCTCAGAGAACTCCGGACCCCTGTCCCGCTGACAGACGGTCTGGACCCTGTACTTATGCTGACTGACCAGGCCACTGTGGCAGGCTGGCAGAACCAGGGCCTGCCAGCTGATCGGCTGTCCATTGAAAACGCAGCCATCCTAAAGTCCAGCCAGCGATGGCCTCTGATCGTGGATCCTCAGCAACAGGCCAGCAAGTGGATCCGAAACCTGTACGGGCCCAGCCTGAGAGTGCTGCAGTATGGTCAGAAAGGGTATCTAGATGTAATTGAGCAGGCTTTGGCCTGTGGTGAGGTGGTCTTGATTGAAAACATGAAGGAGCGAGTGGACCCTCTCCTGGAACCACTGCTAGGAAGACAAACCTTAAAAAAAGGAAGGTACATCAGACTGGGTGATAAGGAGTGCGAGTATGACAAAGGTTTTCGTCTTCTTCTACACACTAAGCAAGCAAACCCTCACTTCCCGCCGGAGCTGCAGGCCCAGACCACACTGATCAACTTCACTGTGACACGCTCCGGTCTGGAGGATCAGCTCCTGGGGCAAGTGGTCACACAAGAAAGGCCTGAGCTGGAAATGATGAAGTTGGAGCTGAGTACTCAGCAGAACTTGTGTCAGATTGAGCTGAAGAGACTTGAGGATGAGCTGTTAAGCAAACTGTCTGCGGCAGAGGGAAACTTCCTGAGAGATACAGCCCTAGTGGAGCAGCTGGAACACACCAAGAACACTGCCAGACACATCCAGAACAAGGCTGTTGCAGCTCGAGAGAATGAGATAAAGACCAACGAGGCACGAGATCTCTACAGGCCAGCAGCTGAGAGAGCCGCACTGCTCTACTTCATTATTAAAGAACTTCACAATGTTAATCCCATGTACCAGTACTCCCTCAAGGCCTTCAACAAAGTGTTCCTAAAAGCTATTGCGAGAGCTCCAAGTGATGAAGATGTATCGGTGCGTGTTTTATCTCTGACCGAGTCCATTACCCATTCAGCCCTTCAGTACACCTGCCAGGGGCTCTTCCAGCGGGACCGACTCACCTTCCTCACCCACACCGCCCTCCAGGTTCTGCTGATGAGAGGCTTCATTGATGGTGAGGATCTAGAGATTCTGCTAAGGTTTCCTGTAGAGATTTGCGAGAGCAGTCCTGTCAGCTTCCTGTCGCCACAGGCCTGGGGTGCTATTAAGGATGCATTCAGAGGTCTGGACAGGGATGTTGAAGGGTCTGCCAAGCGCTGGAAGAAACTGGTGGAGTCTGAGTGTCCAGAAAGAGAGCGGTTCCCTCAGGACTGGAAGACCAAGAGCCCTCTCCAGAGACTCATCATTCTAAGAGCGATCCGGCCTGACAGGATGACCTATGCTCTCCGaaattttATTGAGGACAGTTTGGGACCCAAGTATGTGCACATCAGTCATATGgagtttgaaaaatgttttgagGAGTGCAGTCCAACAACACCAGTGTTCTTCATCCTTTCTCCTGGACTTGGCTTTACCACAGACAGAGGGAACTTCCATAATGTGTCCTTAGGTCAAGGACAAGAAACTGTAGCTGAAATAGCGTTGGAGACCGCAGCTAAAAATGGACATTGGGTCATGCTGCAGAATATCCACCTGCTATCACAGTGGTTGAGTCGTCTGGAGGAGATGTTGGAGAACACGGCTAGCAATGCTCACTCAAACTACAGAGTGTTCATGAGTGGAGAACCAGCTCCCAATCCACATGAGCATCTAATCCCTCGCACCATCCTGGAGAACTCTCTCAAACTCACCACTGAACCCCCAACTGGCATGAACTCTACCTTACATGCTGCTCTGGACAACTTCAGCAAGGATACTCTGGAAATGTGTTCTCGAGAGCAGGAGTTTAAAGGACTCATGTTCTCGCTGTGTTACTTCCATGCCTGTGTGAGTGAGAGGCGGAAGTTTGGACCTCAGGGTTGGAACCACAAATACCCATTCAACAATGGAGATCTGAATATTTCAGCTAATGTTCTGTACAACTACCTGGAGGCCAGTACCAAAGTACCATGGGAGGATCTTTGTTATCTGTTTGGAGAGATCATATATGGAGGACACATCACTGATGAGAGAGACAGGATGCTCTGCCGCACGTACCTTCAGGAGTTCATCAATCCCAAGATGTTTGAAGGGGAGCTGTTTTTGTGTCCTGGCTTTCCTGCTCCTCCAGATCTGGACTACAGTGAGTATCACAGGTATGTGGATGAAAGGTTGCCCTCGGAAAGCCCCGCTCTCTTCAGACTGCACCCGAATGCTGAGATTGAGTTCATGACGGCCACGTCTGAGAGCCTCTTCAAAACCTTACTGGAGCTGCAGCCTAGAGACTCCACAACAGCAGAGGGAGCAACACAGTACACAGAGGAGAAGGTGAGGAGTGTTGTGGATGAGCTCCTGGAGAAGTTGCCTGAGGAGTATAATGTGGCAGAGCTGATGTCTAAAACAGCTCAGAGGAGCCCGTATGTCCTGGTTTGTCTGCAAGAGTGTGAACGCATGAATCTACTGCTGGAACACATACACACTTCATTAAAAGAGCTCCATCTGGCACTCAAGGGTGAACTGAGTCTTTCTTCAGACATGGAGCTCCTCCAAACAGCTTTGTTCTATGATGTTGTTCCTGAGAGTTGGAGCAGGCTGACCTTTCCTTCAACTAAAACCCTGCCTCAGTGTGATGTTCTGGCTCAGTGTCGAGAGCTGGACACATGGACTCACGACTTTGTGTTTCCCGCCGTGGTTTGGATCTCTGGACTTTTTAGCCCTCAGTCATTTCTTACAGCAATTATGCAGAGTATAGCTCGCAAAAACAAGTGGCCTTTAAATAAGATGAGCCTGTCTGTGGATGTCACTAAGAAAAGCAAGGATGATTATGGGCATCCACCTCGAGAGGGAGCCTACATACATGGACTCTACATAGAGGGTGCACGCTGGGATTGCTCCTCAGGTCTGTTGTCAGAGGCTGTCCTGAAAGATTTGACTCCAGCAATGCCAGTGCTGTACATAAGAGCAGTGCCTGTCGACCAGCAGGATCTGAAGAACACGTATGAATGTCCAGTGTACCGCACAAAACAACGCGGCACCACATACATCTGGAGCTTCCCACTCAAAACACACCACCCTCCGGCAAAATGGGTTCTCGCTGGAACGGCCCTGCTTCTGACTGTATAAAACAAGCTCTAGCTCGATTTCGCTTGTATAGCATGCCTATCCATCTTTTTCCCTACCTGACTATACTTCGAAACAGTTGCTTTGTGCTTTATCGTTTACAGTCAAAATAATGTTACACTTGGTATTTTAACGTGACATTAATATCACAAGTCTATATGTGGCCAAAGCTCCTATGGTTATTTTCTATAGTACAGTagttcaacacatttataaaatagGCTATGGAAATACTCTTTTTAAGCAGTTATTTATGGTCTATTGAAGGTAATTTACTTAAAACTGAAGTAGAATAATGGTACCTGATTTTACACAGTTTTTAAACATACACTTACAATTTAACAGAAGTTACTCATATAGACATCACAAAGTGGGATGAACAGCATTCttacattcattcaataattttcctttggcttagtcccttatttatcaggggttaccacagcagcatgagccgccaactattccaacataggttttacagcagatgaccttccagtcTACCAATTTCTgtaaaacacccattcacacacacacacacacacacacacacacacacgcacacgcaaacacacacacatacaactgtcaatttagttaatccaatttacctataccggaTGCCTTAGAACTGTAGGGGAGCCATAacccgaaccagtgaccttcttgctgtggggcgacaatgctaaccactgagccaacatgaCACCCTGGTATTGTAAGAGTATTATGTTAATTAAATCAGCATTTTTAGATGAAAAAATGAAAGGTTTTTATATTAGCCTGTAATCACATGCACATACACTGCATTTTGTTGCATGATTAATGCAATGGAGCATGTTTTGTGGCCTAGTGCAATAATCAAATAGAAAATGCTAGGATTTACTGGCGATACGCATCGTGTATTTCACGCATTACTGTACTTTTAACTCAGATTGTGTTTCACAGAAAATGCTGTATACTGTTGTAATTATGGGTCACTTACTGCAACTTGTGCCAAACATCTTTCCATGAGAACAGAAAGTCTTGTCAATGTATGTGATATAGTTCTTAAGTACCTTAGCAAAGATATATTTAAAACACTATTACTCGTGTATACTgttatattgtaaaatgttaccttaCACATAGATATATGATTTAGTACATAATAAAGATATTATGAGCCATGTTTTTGTCTTCAAATCCACATGAAATTAAAACTTATAATGTTAATTTTGCTATTTCATATTGTTAGTTTTAAGTGAACAACAACTCCCTACAAATTAATACCCCCAAAACTTTTGGTATTTCAGTGTTCTTTAATCAAaatatgacaatttgcttttactTTGGAATGGCAGTACTTTGACGGCTTGGGTGAAATATACTTACCATGCCTTATCCAATAATTAGTGTATTGTGACTGAAAAATAAGAGGAGCACAATACTAATACTCCACACCTTGTATTTGTACTTTCAGTTGAAGACATGATATCAGACTGAAATAAAAGTATGCAGCAAATTCTGGTTTGCACTAAGGGTGCAATGGTTCTtggtaaataaaaca

Function

GO: NA

KEGG: NA

Ensembl:

ensembl_id ENSDART00000138744

JBrowse2

Neighbor

RNA id RNA type direction distance location representative gene id
TCONS_00020774 lncRNA downstream 30420 19145147 ~ 19150743 (-) True XLOC_010604
TCONS_00020770 lncRNA downstream 220577 18896967 ~ 18960586 (-) False XLOC_010601
TCONS_00021795 lncRNA downstream 680032 18495694 ~ 18501131 (-) False XLOC_010598
TCONS_00022140 lncRNA downstream 680046 18472943 ~ 18501117 (-) False XLOC_010598
TCONS_00020759 lncRNA downstream 1031157 18145893 ~ 18150006 (-) False XLOC_010596
TCONS_00021796 lncRNA upstream 241421 19495744 ~ 19497804 (-) True XLOC_010608
TCONS_00020782 lncRNA upstream 362765 19617088 ~ 19618074 (-) False XLOC_010610
TCONS_00020783 lncRNA upstream 362765 19617088 ~ 19618599 (-) True XLOC_010610
TCONS_00020784 lncRNA upstream 372203 19626526 ~ 19627832 (-) True XLOC_010611
TCONS_00020785 lncRNA upstream 377091 19631414 ~ 19633025 (-) False XLOC_010612
TCONS_00020773 mRNA downstream 154430 19025241 ~ 19026733 (-) True XLOC_010603
TCONS_00020772 mRNA downstream 154749 19025023 ~ 19026414 (-) False XLOC_010603
TCONS_00020771 mRNA downstream 220550 18959353 ~ 18960613 (-) True XLOC_010601
TCONS_00020768 mRNA downstream 220830 18694830 ~ 18960333 (-) False XLOC_010601
TCONS_00020767 mRNA downstream 478914 18689930 ~ 18702249 (-) False XLOC_010601
TCONS_00020778 mRNA upstream 52199 19306522 ~ 19373310 (-) True XLOC_010605
TCONS_00020780 mRNA upstream 282715 19537038 ~ 19568795 (-) False XLOC_010609
TCONS_00020781 mRNA upstream 286194 19540517 ~ 19568388 (-) True XLOC_010609
TCONS_00020788 mRNA upstream 585823 19840146 ~ 20006270 (-) False XLOC_010616
TCONS_00020789 mRNA upstream 588211 19842534 ~ 19890366 (-) False XLOC_010616
TCONS_00020769 other downstream 316777 18864270 ~ 18864386 (-) True XLOC_010602
TCONS_00020765 other downstream 597825 18580724 ~ 18583338 (-) True XLOC_010599
TCONS_00020762 other downstream 680022 18495540 ~ 18501141 (-) False XLOC_010598
TCONS_00020779 other upstream 167972 19422295 ~ 19424133 (-) True XLOC_010607
TCONS_00020792 other upstream 621947 19876270 ~ 19882947 (-) False XLOC_010616
TCONS_00020793 other upstream 624521 19878844 ~ 19970367 (-) True XLOC_010616
TCONS_00020802 other upstream 1139370 20393693 ~ 20393809 (-) True XLOC_010623
TCONS_00020803 other upstream 1147897 20402220 ~ 20492696 (-) True XLOC_010622

Expression Profile

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