RNA id: TCONS_00020777


Basic Information

Item Value
RNA id TCONS_00020777
length 118
RNA type rRNA
GC content 0.51
exon number 1
gene id XLOC_010606
representative True

Chromosome Information

Item Value
chromosome id NC_007127.7
NCBI id CM002900.2
chromosome length 55266484
location 19190514 ~ 19190631 (-)
genome version GRCz11_2017_zebrafish_Genome
species zebrafish
(Danio rerio)

Sequence

TTTTACAGCCATAtaaccctgcagcccaagaccggttactcactgaagctaagcagggctgagcctggtcagtgccTGAATAGGAGACCACATGGACAAACTAGGTTgctagtggtgt

Function

GO: NA

KEGG: NA

Ensembl:

ensembl_id ENSDART00000118132

JBrowse2

Neighbor

RNA id RNA type direction distance location representative gene id
TCONS_00020774 lncRNA downstream 39771 19145147 ~ 19150743 (-) True XLOC_010604
TCONS_00020770 lncRNA downstream 229928 18896967 ~ 18960586 (-) False XLOC_010601
TCONS_00021795 lncRNA downstream 689383 18495694 ~ 18501131 (-) False XLOC_010598
TCONS_00022140 lncRNA downstream 689397 18472943 ~ 18501117 (-) False XLOC_010598
TCONS_00020759 lncRNA downstream 1040508 18145893 ~ 18150006 (-) False XLOC_010596
TCONS_00021796 lncRNA upstream 305113 19495744 ~ 19497804 (-) True XLOC_010608
TCONS_00020782 lncRNA upstream 426457 19617088 ~ 19618074 (-) False XLOC_010610
TCONS_00020783 lncRNA upstream 426457 19617088 ~ 19618599 (-) True XLOC_010610
TCONS_00020784 lncRNA upstream 435895 19626526 ~ 19627832 (-) True XLOC_010611
TCONS_00020785 lncRNA upstream 440783 19631414 ~ 19633025 (-) False XLOC_010612
TCONS_00020773 mRNA downstream 163781 19025241 ~ 19026733 (-) True XLOC_010603
TCONS_00020772 mRNA downstream 164100 19025023 ~ 19026414 (-) False XLOC_010603
TCONS_00020771 mRNA downstream 229901 18959353 ~ 18960613 (-) True XLOC_010601
TCONS_00020768 mRNA downstream 230181 18694830 ~ 18960333 (-) False XLOC_010601
TCONS_00020767 mRNA downstream 488265 18689930 ~ 18702249 (-) False XLOC_010601
TCONS_00020778 mRNA upstream 115891 19306522 ~ 19373310 (-) True XLOC_010605
TCONS_00020780 mRNA upstream 346407 19537038 ~ 19568795 (-) False XLOC_010609
TCONS_00020781 mRNA upstream 349886 19540517 ~ 19568388 (-) True XLOC_010609
TCONS_00020788 mRNA upstream 649515 19840146 ~ 20006270 (-) False XLOC_010616
TCONS_00020789 mRNA upstream 651903 19842534 ~ 19890366 (-) False XLOC_010616
TCONS_00020769 other downstream 326128 18864270 ~ 18864386 (-) True XLOC_010602
TCONS_00020765 other downstream 607176 18580724 ~ 18583338 (-) True XLOC_010599
TCONS_00020762 other downstream 689373 18495540 ~ 18501141 (-) False XLOC_010598
TCONS_00020763 other downstream 689373 18497295 ~ 18501141 (-) False XLOC_010598
TCONS_00020764 other downstream 689397 18497554 ~ 18501117 (-) True XLOC_010598
TCONS_00020779 other upstream 231664 19422295 ~ 19424133 (-) True XLOC_010607
TCONS_00020792 other upstream 685639 19876270 ~ 19882947 (-) False XLOC_010616
TCONS_00020793 other upstream 688213 19878844 ~ 19970367 (-) True XLOC_010616
TCONS_00020802 other upstream 1203062 20393693 ~ 20393809 (-) True XLOC_010623
TCONS_00020803 other upstream 1211589 20402220 ~ 20492696 (-) True XLOC_010622