RNA id: CI01000364_00002233_00008090.mRNA


Basic Information

Item Value
RNA id CI01000364_00002233_00008090.mRNA
length 1441
RNA type mRNA
GC content 0.45
exon number 8
gene id CI01000364_00002233_00008090
representative True

Chromosome Information

Item Value
chromosome id CI01000364
NCBI id null
chromosome length 520240
location 2233 ~ 8208 (-)
genome version v1_2015/06_NatureGenetics_grasscarp_Genome
species grasscarp
(Ctenopharyngodon idella)

Sequence

ACATATTACATACTGAGAGACAGGGACATCCCCTAACTTACTCTAGACTAATTAGCATTAAAGGCTGGACCTAAAGGAGTGTCTAAGATATATAGATTGAATGTCAGGAAACTACAACATGTATACAACTCAGATTGAGCTACTGAAGTTAAGTAAAGAAAAAGGAAGACATGAGAAACACTTTCACAAAAAGTCCCCCAAAACAGAAAAAGGAAAAGCTGCTCAGTGCAGAATTACTCTATTGTGTACTGTAGAATTACTGGAATATTTCTCAACCCATCTTAACTTTTTACCTCTACTGTATTCTCCAGTGATCATGGACAAACCAGTATGCTTGATTGACACGGAGTCAGATGGGAAGCTGTGTGTGCAGCAGTCAGCTCTACAGATCCTGCAGCAGATCCAGCAGCCAGTGGTGGTGGTGGCCGTGGTGGGTCTCTACCGCACCGGGAAGTCCTACCTGATGAATCGCCTCGCAGGACAACAAACAGGGTTTGCATTGGGCAGCACCATCGAGTCCAAGACGAAGGGCATCTGGATGTGGTGTGTGCCTCACCCCACTAAAGCAGGAACCACTCTGGTGCTGCTGGACACTGAGGGACTCGGAGACGTGGACAAGGGGGACTCAAAGCATGACACCAAGATCTTCTCTCTGGCCGTCCTTCTGAGTAGCACTCTAGTGCTGAACAGCCGAGGAACTATTGACAACAGGGCCATAGAGGAACTGCAATATGTCACTGAGTTAACAGAGTACATCAAGATCAAATCACCTGATGAAGTTGTAGATGATTCAGAGTTTGTGAAGTTCTTCCCCAAATTCATCTGGGCTGTGAGGGACTTCACTCTGCAGCTAAACATCAATGGCCAAGATGCAACAGAGGATGAATATCTAGAGTTTGCTCTGAAACTAAAACTAGGTAACTCAAGTCAAGTGAATAAATACAACCTTCCAAGAGAGTGCATTCGTAAATATTTCCCATCACGGAAATGTTTCACCTTCCCATTCCCAACCCATCCAGACAATGTCTCTTATCTGGAGACACTGGACCCAGCTGAGATTTCAAAACAATTCTTGGAGGTCTCTGATCGTTTCTTCCAGTTTATCTTTGACCAGAGCCAAGTGAAAAATCTGAAAGATGGACACACAGTCACCGGCAGAGTTTTGGGCCATCTTGTGAAAATGTACGTGGACACAATCTCCAGTGGGGCTGTGCCATGTCTGGAGAATGCTGTGATCGCCATGTCAATGATTGAGAATGAAGCTGCAGTGAAGGAAGGACTTGAGGTTTACCAGAGTGGAATGGAGAAGCTCAAGGACTCCTTTCCTCTGGAACTGAATGAAATCACCTCTGAACACCAGAGTTTCAGCCTCATGGCAGCACAAACCTTCATGAAACGCTCCTTCAGGGACCATGATGGGAAGTACTTGACATCTTTAGAG

Function

GO: NA

KEGG: NA

JBrowse2

Neighbor

RNA id RNA type direction distance location representative gene id
TU596672 lncRNA upstream 6761 14969 ~ 44975 (-) False G520103
TU596654 lncRNA upstream 12102 20310 ~ 51409 (-) False G520100
TU596657 lncRNA upstream 12102 20310 ~ 50438 (-) False G520100
TU596658 lncRNA upstream 12102 20310 ~ 51409 (-) False G520100
TU596660 lncRNA upstream 12102 20310 ~ 50847 (-) False G520100
CI01000364_00037534_00041491.mRNA mRNA upstream 28466 36674 ~ 43719 (-) True CI01000364_00037534_00041491
CI01000364_00081223_00107594.mRNA mRNA upstream 72972 81180 ~ 107793 (-) True CI01000364_00081223_00107594
CI01000364_00110528_00118790.mRNA mRNA upstream 102221 110429 ~ 118790 (-) True CI01000364_00110528_00118790
CI01000364_00373309_00374559.mRNA mRNA upstream 365101 373309 ~ 374559 (-) True CI01000364_00373309_00374559
CI01000364_00391142_00398789.mRNA mRNA upstream 382743 390951 ~ 398930 (-) True CI01000364_00391142_00398789
TU596682 other upstream 242134 250342 ~ 270995 (-) False G520108
TU596843 other upstream 442825 451033 ~ 451562 (-) False G520248
TU596844 other upstream 442825 451033 ~ 451562 (-) False G520248

Expression Profile