RNA id: CI01000364_00391142_00398789.mRNA


Basic Information

Item Value
RNA id CI01000364_00391142_00398789.mRNA
length 896
RNA type mRNA
GC content 0.44
exon number 4
gene id CI01000364_00391142_00398789
representative True

Chromosome Information

Item Value
chromosome id CI01000364
NCBI id null
chromosome length 520240
location 390951 ~ 398930 (-)
genome version v1_2015/06_NatureGenetics_grasscarp_Genome
species grasscarp
(Ctenopharyngodon idella)

Sequence

TTTGTCTTCACAGAACTGCATTGTGTGCCATGTGTGCTACCTCTCTCTACAAGCTTTTTTATTAGGAGTTAGTTTTGTCTGGCAGGAGTGAAGCCTTTCTCACTCTCTTTCTTTATATAATGAAAAGAAAAGAGAGTTATCATGTCGAGAGAATCCACTAAGAGATGCGTGCCGCCCTGTTTACAACCAATCTCAGAGGATGATCCATATGAGTTCAGCATCACTTGTCTGGGGGAACATCACGCCTCAAGGGGACTTATTTCCCATCAAAGTGCTCCACTCGCCTTTTTTTCGGAAAGAGTGAACCTTTGCTTTCTCAATGATGAGATGAAACAGTGTTTTGATCTAGCTGAAGGGCAAGACATGGGTCTTCCCCTTTCTTCAGACTGGGCTGAGGACATTAGTTCTCTTGGATCGTTGCAGGCTGTCCTGGGGTGTGCTCGCTCCCTTCCTTTGTGTCTTCCCGGATTTTGGATTCTCTGGACTGTTTGTGTGTTGCCCTGTTTTCTGGGCTGGATTATTCCCTCGGTCTCTGGTCCTGGGGGAGTCCTCATCAGAGGGTACAGCCAACATCCTCTGCAGAGATTACTTCACCTCTCCATCCAGTCCCTTGAGTATGGAGATCACGACGTCCTTCTGTCCGCTGCTGAAGCACGCCTCAGCACTTCTTCAAAGTGGGCTGGGGACTTATGCGGAGGGAACTGAGCCAATGGGAGATTCTCTTTTTTTTTCGTTTCTATGATCGCGTGTAAATGAATTGTGTGTTTGTAAGCTATGATTTTGTGATTCATTGTTGAAACTACTCTAATATGAAAATAACTATATTCAGCCTTTCATTCAGAATGTTTTTACTTGTCTGGTTGATATTTGGCTACATTTAATTTTGAGGAATTAAA

Function

GO: NA

KEGG: NA

JBrowse2

Neighbor

RNA id RNA type direction distance location representative gene id
TU596664 lncRNA downstream 72379 284854 ~ 318572 (-) False G520100
TU596663 lncRNA downstream 72379 285191 ~ 318572 (-) True G520100
TU596684 lncRNA downstream 120365 250342 ~ 270586 (-) True G520108
TU596813 lncRNA upstream 25793 424723 ~ 425045 (-) True G520221
TU596830 lncRNA upstream 42473 441403 ~ 441651 (-) True G520238
TU596845 lncRNA upstream 52267 451197 ~ 451562 (-) True G520248
TU596857 lncRNA upstream 64056 462986 ~ 463228 (-) True G520259
TU596861 lncRNA upstream 69790 468720 ~ 468944 (-) True G520263
CI01000364_00373309_00374559.mRNA mRNA downstream 16392 373309 ~ 374559 (-) True CI01000364_00373309_00374559
CI01000364_00110528_00118790.mRNA mRNA downstream 272161 110429 ~ 118790 (-) True CI01000364_00110528_00118790
CI01000364_00081223_00107594.mRNA mRNA downstream 283158 81180 ~ 107793 (-) True CI01000364_00081223_00107594
CI01000364_00037534_00041491.mRNA mRNA downstream 347232 36674 ~ 43719 (-) True CI01000364_00037534_00041491
CI01000364_00002233_00008090.mRNA mRNA downstream 382743 2233 ~ 8208 (-) True CI01000364_00002233_00008090
CI01000364_00455879_00458332.mRNA mRNA upstream 56949 455879 ~ 458332 (-) True CI01000364_00455879_00458332
TU596682 other downstream 119956 250342 ~ 270995 (-) False G520108
TU596843 other upstream 52103 451033 ~ 451562 (-) False G520248
TU596844 other upstream 52103 451033 ~ 451562 (-) False G520248

Expression Profile