RNA id: TU596492


Basic Information

Item Value
RNA id TU596492
length 745
RNA type TUCP
GC content 0.47
exon number 2
gene id G520002
representative False

Chromosome Information

Item Value
chromosome id CI01000364
NCBI id null
chromosome length 520240
location 31744 ~ 43714 (+)
genome version v1_2015/06_NatureGenetics_grasscarp_Genome
species grasscarp
(Ctenopharyngodon idella)

Sequence

CTGAAGTGTAGTTGAGCTGTTGTGTGTTTGTGTCTCTGTATTCATGCAGTAAAATGGCAGAAGCCAGAATTTCAGTGGATCAGGATGAGTTCCTTTGTCCAGTGTGTCTGGATCTCCTGAAGGATCCAGTGACAACTTCCTGTGGACACAGTTACTGTAAGAGCTGTATTACAGGCTGCTGGGATCAGGAGGATCAGATGAGAGTCTACAGCTGCCCTCAGTGCAGACAGACCTTCAGTCCAAGACCTGCTTTATCTAAAAACACCATGCTGGCTGAAGTGGTGGAGAAACTGAAGAAGAGAAAACTTCCTGCTGACTGTTACGCTGGAGCTGGAGATGTGCAGTGTGATGTCTGTACTGGAAGAAAACACAAAGCCGTCAAATCCTGTCTGGTGTGTCTGGAGTCTTACTGTCAAACTCATTTTGACCGCCATGAGGAGTTTCACTCACGTAAGCCACATAAAGTGACTGAAGCCACTGGACGACTGCAGGAGATGATCTGCCCGAAACACAACAAGATCCTTGAGGTTTTCTGCCGCACTGATCAGAAGTGTATATGTGTGCTGTGTACGATGGATGAACATAAAAACCACAACACTGTATCAGCTGCAGCACAGAGGACAGAGAAACAGAAACAGCTGAAGGAGATGCAGAGGTCGTTCCAGCAGAGGATCCAGCAGAGAGAGAAAGATCTTCAGCAGCTGAGAGAGGCTGTGGAGTCTCATAAGGTGAGTCTGGAGANNNN

Function

GO: NA

KEGG: NA

JBrowse2

Neighbor

RNA id RNA type direction distance location representative gene id
TU596493 lncRNA downstream 6928 39907 ~ 43714 (+) True G520002
TU596543 lncRNA downstream 23343 56322 ~ 74905 (+) False G520020
TU596555 lncRNA downstream 40097 73076 ~ 106997 (+) True G520022
TU596536 lncRNA downstream 43134 76113 ~ 111638 (+) False G520020
TU596539 lncRNA downstream 43134 76113 ~ 115748 (+) False G520020
CI01000364_00151094_00203772.mRNA mRNA downstream 117839 150818 ~ 203857 (+) False CI01000364_00151094_00203772
CI01000364_00263052_00264410.mRNA mRNA downstream 230006 262985 ~ 264747 (+) True CI01000364_00263052_00264410
CI01000364_00287825_00289294.mRNA mRNA downstream 254068 287047 ~ 291072 (+) True CI01000364_00287825_00289294
CI01000364_00294611_00295771.mRNA mRNA downstream 261422 294401 ~ 295950 (+) True CI01000364_00294611_00295771
CI01000364_00382475_00385399.mRNA mRNA downstream 349496 382475 ~ 386117 (+) True CI01000364_00382475_00385399
TU596513 other downstream 11447 44426 ~ 45846 (+) True G520007
TU596480 other downstream 147368 180347 ~ 182853 (+) True G520001
TU596517 other downstream 208342 241321 ~ 324231 (+) True G520009
TU596524 other downstream 217321 250300 ~ 255006 (+) True G520012
TU596526 other downstream 276389 309368 ~ 337107 (+) True G520013

Expression Profile