RNA id: TCONS_00021260


Basic Information

Item Value
RNA id TCONS_00021260
length 595
RNA type processed_transcript
GC content 0.40
exon number 2
gene id XLOC_010863
representative True

Chromosome Information

Item Value
chromosome id NC_007127.7
NCBI id CM002900.2
chromosome length 55266484
location 34321394 ~ 34425561 (-)
genome version GRCz11_2017_zebrafish_Genome
species zebrafish
(Danio rerio)

Sequence

GCCCTGTTGGCTCGAGAGCGTCCACATAACGCCGAGAGAGGCGTCAGCAGCGATTCCGTTTGACAGGCAATGGGATGCGGACCACGACACGCTGCTCAACGACTACAACAACGCCAACATCTGTGTCAGGTTGAAGACTCCAATTCCCGTTGTAATTGGATGGAAAAGAGTGACTTGTTACATTCATCAAATTCCACCCTTTGATACTCTACAAAATTAAGAATGACCAACGGGCTTGAAGCGACATAAGCCAAAGTAAGTGATGACTTTTGCTTGCAACCACCTGGGAGaaagggctgggccgataaaagATATTATATCAAATCTCGATAAAATTGATGTCAATaccaatgataagctctggacttttttgcTCTATATTTATCTACAGTAAAAGTCAATCAAACAGTAAAAatatgcaacaatgggaatctaaaagtgtgttgatattagaaatGAACTAAATTTTCTGCCGCCGAAAATTTATTggccgaaaatatgttatgccactTAATGGACCCACTAATTTTtatggcttcagtcattgttggggtagtCTTTAAAATCTAGAAACAtcttatatcgaaatatatac

Function

GO: NA

KEGG: NA

Ensembl:

ensembl_id ENSDART00000172162

JBrowse2

Neighbor

RNA id RNA type direction distance location representative gene id
TCONS_00022198 lncRNA downstream 356427 34039521 ~ 34044379 (-) True XLOC_010859
TCONS_00022197 lncRNA downstream 664047 33735328 ~ 33736759 (-) True XLOC_010855
TCONS_00022196 lncRNA downstream 808226 33587815 ~ 33592580 (-) True XLOC_010853
TCONS_00021242 lncRNA downstream 808700 33582868 ~ 33592106 (-) False XLOC_010853
TCONS_00021241 lncRNA downstream 808803 33582868 ~ 33592003 (-) False XLOC_010853
TCONS_00021815 lncRNA upstream 132111 34557672 ~ 34565488 (-) False XLOC_010866
TCONS_00022199 lncRNA upstream 132297 34557858 ~ 34561503 (-) False XLOC_010866
TCONS_00022200 lncRNA upstream 235499 34661060 ~ 34886237 (-) False XLOC_010867
TCONS_00022201 lncRNA upstream 270207 34695768 ~ 34886227 (-) False XLOC_010867
TCONS_00022202 lncRNA upstream 277833 34703394 ~ 34875906 (-) False XLOC_010867
TCONS_00021257 mRNA downstream 62269 34321394 ~ 34338537 (-) False XLOC_010863
TCONS_00021252 mRNA downstream 115700 34199297 ~ 34285106 (-) False XLOC_010861
TCONS_00021254 mRNA downstream 141875 34234112 ~ 34258931 (-) True XLOC_010861
TCONS_00021253 mRNA downstream 187894 34205195 ~ 34212912 (-) False XLOC_010861
TCONS_00021251 mRNA downstream 205804 34185613 ~ 34195002 (-) True XLOC_010860
TCONS_00021261 mRNA upstream 33505 34459066 ~ 34477805 (-) True XLOC_010865
TCONS_00021267 mRNA upstream 490601 34916162 ~ 35329803 (-) False XLOC_010868
TCONS_00021270 mRNA upstream 490736 34916297 ~ 35330001 (-) False XLOC_010868
TCONS_00021269 mRNA upstream 490736 34916297 ~ 35330001 (-) False XLOC_010868
TCONS_00021268 mRNA upstream 490736 34916297 ~ 35330001 (-) False XLOC_010868
TCONS_00021259 other downstream 48745 34351945 ~ 34352061 (-) True XLOC_010864
TCONS_00021255 other downstream 94136 34300279 ~ 34306670 (-) False XLOC_010862
TCONS_00021256 other downstream 94829 34302177 ~ 34305977 (-) True XLOC_010862
TCONS_00021244 other downstream 642521 33750067 ~ 33758285 (-) True XLOC_010856
TCONS_00021239 other downstream 858848 33515766 ~ 33541958 (-) True XLOC_010852
TCONS_00021262 other upstream 131455 34557016 ~ 34564953 (-) False XLOC_010866
TCONS_00021264 other upstream 131455 34557016 ~ 34565638 (-) False XLOC_010866
TCONS_00021263 other upstream 131455 34557016 ~ 34565638 (-) False XLOC_010866
TCONS_00021265 other upstream 134639 34560200 ~ 34564671 (-) True XLOC_010866
TCONS_00021271 other upstream 669285 35094846 ~ 35094960 (-) True XLOC_010869

Expression Profile

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