RNA id: TCONS_00021259


Basic Information

Item Value
RNA id TCONS_00021259
length 117
RNA type rRNA
GC content 0.48
exon number 1
gene id XLOC_010864
representative True

Chromosome Information

Item Value
chromosome id NC_007127.7
NCBI id CM002900.2
chromosome length 55266484
location 34351945 ~ 34352061 (-)
genome version GRCz11_2017_zebrafish_Genome
species zebrafish
(Danio rerio)

Sequence

TATCACAGCTAAatcaccctgcagctcaagacCGGTTACTGACTGAAGGTAtccagggctgagcctggtcagtacttgattgggagaccacatgagaaaactaggttgctgttagaa

Function

GO: NA

KEGG: NA

Ensembl:

ensembl_id ENSDART00000193231

JBrowse2

Neighbor

RNA id RNA type direction distance location representative gene id
TCONS_00022198 lncRNA downstream 307566 34039521 ~ 34044379 (-) True XLOC_010859
TCONS_00022197 lncRNA downstream 615186 33735328 ~ 33736759 (-) True XLOC_010855
TCONS_00022196 lncRNA downstream 759365 33587815 ~ 33592580 (-) True XLOC_010853
TCONS_00021242 lncRNA downstream 759839 33582868 ~ 33592106 (-) False XLOC_010853
TCONS_00021241 lncRNA downstream 759942 33582868 ~ 33592003 (-) False XLOC_010853
TCONS_00021815 lncRNA upstream 205611 34557672 ~ 34565488 (-) False XLOC_010866
TCONS_00022199 lncRNA upstream 205797 34557858 ~ 34561503 (-) False XLOC_010866
TCONS_00022200 lncRNA upstream 308999 34661060 ~ 34886237 (-) False XLOC_010867
TCONS_00022201 lncRNA upstream 343707 34695768 ~ 34886227 (-) False XLOC_010867
TCONS_00022202 lncRNA upstream 351333 34703394 ~ 34875906 (-) False XLOC_010867
TCONS_00021257 mRNA downstream 13408 34321394 ~ 34338537 (-) False XLOC_010863
TCONS_00021252 mRNA downstream 66839 34199297 ~ 34285106 (-) False XLOC_010861
TCONS_00021254 mRNA downstream 93014 34234112 ~ 34258931 (-) True XLOC_010861
TCONS_00021253 mRNA downstream 139033 34205195 ~ 34212912 (-) False XLOC_010861
TCONS_00021251 mRNA downstream 156943 34185613 ~ 34195002 (-) True XLOC_010860
TCONS_00021261 mRNA upstream 107005 34459066 ~ 34477805 (-) True XLOC_010865
TCONS_00021267 mRNA upstream 564101 34916162 ~ 35329803 (-) False XLOC_010868
TCONS_00021270 mRNA upstream 564236 34916297 ~ 35330001 (-) False XLOC_010868
TCONS_00021269 mRNA upstream 564236 34916297 ~ 35330001 (-) False XLOC_010868
TCONS_00021268 mRNA upstream 564236 34916297 ~ 35330001 (-) False XLOC_010868
TCONS_00021255 other downstream 45275 34300279 ~ 34306670 (-) False XLOC_010862
TCONS_00021256 other downstream 45968 34302177 ~ 34305977 (-) True XLOC_010862
TCONS_00021244 other downstream 593660 33750067 ~ 33758285 (-) True XLOC_010856
TCONS_00021239 other downstream 809987 33515766 ~ 33541958 (-) True XLOC_010852
TCONS_00021237 other downstream 1247038 33103883 ~ 33104907 (-) False XLOC_010851
TCONS_00021260 other upstream 48745 34400806 ~ 34425561 (-) True XLOC_010863
TCONS_00021262 other upstream 204955 34557016 ~ 34564953 (-) False XLOC_010866
TCONS_00021264 other upstream 204955 34557016 ~ 34565638 (-) False XLOC_010866
TCONS_00021263 other upstream 204955 34557016 ~ 34565638 (-) False XLOC_010866
TCONS_00021265 other upstream 208139 34560200 ~ 34564671 (-) True XLOC_010866