Gene
RNA
| Item | Value |
|---|---|
| RNA id | TCONS_00021361 |
| length | 863 |
| lncRNA type | sense_over |
| GC content | 0.50 |
| exon number | 6 |
| gene id | XLOC_010918 |
| representative | False |
| Item | Value |
|---|---|
| chromosome id | NC_007127.7 |
| NCBI id | CM002900.2 |
| chromosome length | 55266484 |
| location | 39643268 ~ 39900665 (-) |
| genome version | GRCz11_2017_zebrafish_Genome |
| species | zebrafish (Danio rerio) |
| id | name | namespace |
|---|---|---|
| GO:0017015 | regulation of transforming growth factor beta receptor signaling pathway | biological_process |
| GO:0061035 | regulation of cartilage development | biological_process |
| GO:1990904 | ribonucleoprotein complex | cellular_component |
| GO:0005829 | cytosol | cellular_component |
| GO:0005634 | nucleus | cellular_component |
| GO:0005737 | cytoplasm | cellular_component |
| GO:0008143 | poly(A) binding | molecular_function |
| GO:0003676 | nucleic acid binding | molecular_function |
| GO:0003723 | RNA binding | molecular_function |
| GO:0008266 | poly(U) RNA binding | molecular_function |
| GO:0003730 | mRNA 3'-UTR binding | molecular_function |
| RNA id | RNA type | direction | distance | location | representative | gene id |
|---|---|---|---|---|---|---|
| TCONS_00022217 | lncRNA | downstream | 116883 | 39612894 ~ 39625362 (-) | True | XLOC_010917 |
| TCONS_00021345 | lncRNA | downstream | 632314 | 39094337 ~ 39109931 (-) | False | XLOC_010909 |
| TCONS_00021346 | lncRNA | downstream | 632314 | 39107238 ~ 39109931 (-) | True | XLOC_010909 |
| TCONS_00021344 | lncRNA | downstream | 647711 | 39029883 ~ 39094534 (-) | False | XLOC_010909 |
| TCONS_00021829 | lncRNA | downstream | 700449 | 39030027 ~ 39041796 (-) | False | XLOC_010909 |
| TCONS_00022218 | lncRNA | upstream | 477762 | 40336481 ~ 40338855 (-) | False | XLOC_010923 |
| TCONS_00021367 | lncRNA | upstream | 479865 | 40338584 ~ 40340518 (-) | True | XLOC_010923 |
| TCONS_00021372 | lncRNA | upstream | 663019 | 40521738 ~ 40584050 (-) | False | XLOC_010927 |
| TCONS_00022219 | lncRNA | upstream | 703893 | 40562612 ~ 40568139 (-) | False | XLOC_010927 |
| TCONS_00022220 | lncRNA | upstream | 706708 | 40565427 ~ 40568204 (-) | True | XLOC_010927 |
| TCONS_00021355 | mRNA | downstream | 171413 | 39505163 ~ 39570832 (-) | False | XLOC_010916 |
| TCONS_00021353 | mRNA | downstream | 264499 | 39385483 ~ 39477746 (-) | False | XLOC_010915 |
| TCONS_00021354 | mRNA | downstream | 264736 | 39386346 ~ 39477509 (-) | True | XLOC_010915 |
| TCONS_00021351 | mRNA | downstream | 475018 | 39248644 ~ 39267227 (-) | False | XLOC_010914 |
| TCONS_00021365 | mRNA | upstream | 182094 | 40040813 ~ 40043322 (-) | True | XLOC_010921 |
| TCONS_00021366 | mRNA | upstream | 279314 | 40138033 ~ 40155424 (-) | True | XLOC_010922 |
| TCONS_00021368 | mRNA | upstream | 495097 | 40353816 ~ 40373836 (-) | True | XLOC_010924 |
| TCONS_00021369 | mRNA | upstream | 567154 | 40425873 ~ 40459104 (-) | False | XLOC_010925 |
| TCONS_00021370 | mRNA | upstream | 567367 | 40426086 ~ 40426837 (-) | True | XLOC_010925 |
| TCONS_00021356 | other | downstream | 136584 | 39557786 ~ 39605661 (-) | True | XLOC_010916 |
| TCONS_00021341 | other | downstream | 1110276 | 38626556 ~ 38631969 (-) | True | XLOC_010903 |
| TCONS_00021340 | other | downstream | 1113114 | 38582766 ~ 38629131 (-) | False | XLOC_010903 |
| TCONS_00021338 | other | downstream | 1158383 | 38578429 ~ 38583862 (-) | False | XLOC_010903 |
| TCONS_00021337 | other | downstream | 1179601 | 38562527 ~ 38562644 (-) | True | XLOC_010904 |
| TCONS_00021363 | other | upstream | 26415 | 39885134 ~ 39885251 (-) | True | XLOC_010919 |
| TCONS_00021364 | other | upstream | 177992 | 40036711 ~ 40037796 (-) | True | XLOC_010920 |
| TCONS_00021375 | other | upstream | 823209 | 40681928 ~ 40682703 (-) | True | XLOC_010929 |
| TCONS_00021378 | other | upstream | 1175598 | 41034317 ~ 41035035 (-) | False | XLOC_010932 |
| TCONS_00021390 | other | upstream | 1666071 | 41524790 ~ 41529013 (-) | True | XLOC_010940 |
