RNA id: TCONS_00021514


Basic Information

Item Value
RNA id TCONS_00021514
length 115
RNA type rRNA
GC content 0.56
exon number 1
gene id XLOC_011015
representative True

Chromosome Information

Item Value
chromosome id NC_007127.7
NCBI id CM002900.2
chromosome length 55266484
location 45174446 ~ 45174560 (-)
genome version GRCz11_2017_zebrafish_Genome
species zebrafish
(Danio rerio)

Sequence

GCCGGCAGCtatctctctgcaactctcacatggttgcccactgaggctaagcagggctgcgcttgGTCAGTAcgtggatggaagaccacataggaaagctaggttgctgctggaa

Function

GO: NA

KEGG: NA

Ensembl:

ensembl_id ENSDART00000181849

JBrowse2

Neighbor

RNA id RNA type direction distance location representative gene id
TCONS_00022238 lncRNA downstream 75740 45087971 ~ 45098706 (-) True XLOC_011009
TCONS_00022237 lncRNA downstream 159966 45012914 ~ 45014480 (-) True XLOC_011004
TCONS_00021492 lncRNA downstream 500686 44669393 ~ 44673760 (-) True XLOC_010996
TCONS_00021491 lncRNA downstream 505686 44665604 ~ 44668760 (-) False XLOC_010996
TCONS_00021485 lncRNA downstream 878956 44257469 ~ 44295490 (-) True XLOC_010993
TCONS_00021519 lncRNA upstream 53543 45228103 ~ 45235947 (-) False XLOC_011018
TCONS_00021835 lncRNA upstream 53884 45228444 ~ 45230712 (-) False XLOC_011018
TCONS_00021524 lncRNA upstream 141630 45316190 ~ 45322513 (-) True XLOC_011021
TCONS_00022239 lncRNA upstream 617825 45792385 ~ 45795127 (-) True XLOC_011023
TCONS_00022240 lncRNA upstream 807913 45982473 ~ 45984353 (-) False XLOC_011027
TCONS_00021512 mRNA downstream 22277 45149355 ~ 45152169 (-) True XLOC_011013
TCONS_00021508 mRNA downstream 79847 45087810 ~ 45094599 (-) False XLOC_011009
TCONS_00021507 mRNA downstream 93634 45077593 ~ 45080812 (-) True XLOC_011008
TCONS_00021505 mRNA downstream 104564 45044642 ~ 45069882 (-) False XLOC_011007
TCONS_00021506 mRNA downstream 115527 45044651 ~ 45058919 (-) True XLOC_011007
TCONS_00021516 mRNA upstream 28042 45202602 ~ 45225520 (-) False XLOC_011017
TCONS_00021517 mRNA upstream 33027 45207587 ~ 45209684 (-) True XLOC_011017
TCONS_00021518 mRNA upstream 53541 45228101 ~ 45235947 (-) False XLOC_011018
TCONS_00021520 mRNA upstream 54198 45228758 ~ 45230084 (-) True XLOC_011018
TCONS_00021522 mRNA upstream 74495 45249055 ~ 45288599 (-) True XLOC_011020
TCONS_00021511 other downstream 30074 45140858 ~ 45144372 (-) True XLOC_011012
TCONS_00021510 other downstream 39967 45130921 ~ 45134479 (-) True XLOC_011011
TCONS_00021509 other downstream 67872 45104613 ~ 45106574 (-) True XLOC_011010
TCONS_00021503 other downstream 155906 45018424 ~ 45018540 (-) True XLOC_011005
TCONS_00021499 other downstream 297127 44873544 ~ 44877319 (-) True XLOC_011000
TCONS_00021515 other upstream 12113 45186673 ~ 45193152 (-) True XLOC_011016
TCONS_00021521 other upstream 67821 45242381 ~ 45245742 (-) True XLOC_011019
TCONS_00021532 other upstream 1042248 46216808 ~ 46216909 (-) True XLOC_011030
TCONS_00021533 other upstream 1165983 46340543 ~ 46340657 (-) True XLOC_011031
TCONS_00021580 other upstream 2768583 47943143 ~ 47943257 (-) True XLOC_011054