RNA id: TCONS_00021533



Basic Information


Item Value
RNA id TCONS_00021533
length 115
RNA type rRNA
GC content 0.54
exon number 1
gene id XLOC_011031
representative True

Chromosome Information


Item Value
chromosome id NC_007127.7
NCBI id CM002900.2
chromosome length 55266484
location 46340543 ~ 46340657 (-)
genome version GRCz11_2017_zebrafish_Genome
species zebrafish
(Danio rerio)

Sequence


accggcagctagctctctgctacTCTGACATGGTTGcccattgaagctaagcagggctgctcctggtcagtacctggatgggagactatATGGGAATGCTagtttgctgccggaa

Function


GO: NA

KEGG: NA

Ensembl:

ensembl_id ENSDART00000190079

JBrowse2


Neighbor


RNA id RNA type direction distance location representative gene id
TCONS_00022257 lncRNA downstream 137198 46196125 ~ 46203345 (-) True XLOC_011029
TCONS_00021531 lncRNA downstream 243111 46087489 ~ 46097432 (-) True XLOC_011028
TCONS_00022256 lncRNA downstream 246633 46087489 ~ 46093910 (-) False XLOC_011028
TCONS_00022254 lncRNA downstream 349701 45984668 ~ 45990842 (-) False XLOC_011027
TCONS_00021535 lncRNA upstream 9571 46350228 ~ 46393111 (-) False XLOC_011032
TCONS_00022258 lncRNA upstream 9571 46350228 ~ 46393119 (-) False XLOC_011032
TCONS_00021534 lncRNA upstream 9571 46350228 ~ 46393285 (-) True XLOC_011032
TCONS_00022259 lncRNA upstream 55345 46396002 ~ 46431086 (-) False XLOC_011033
TCONS_00022260 lncRNA upstream 55345 46396002 ~ 46431150 (-) False XLOC_011033
TCONS_00021529 mRNA downstream 422860 45912647 ~ 45917683 (-) False XLOC_011026
TCONS_00021530 mRNA downstream 423221 45914480 ~ 45917322 (-) True XLOC_011026
TCONS_00021528 mRNA downstream 430493 45904153 ~ 45910050 (-) True XLOC_011025
TCONS_00021526 mRNA downstream 485661 45796602 ~ 45854882 (-) False XLOC_011024
TCONS_00021527 mRNA downstream 485661 45797026 ~ 45854882 (-) True XLOC_011024
TCONS_00021537 mRNA upstream 177457 46518114 ~ 46525135 (-) False XLOC_011034
TCONS_00021538 mRNA upstream 178013 46518670 ~ 46525155 (-) False XLOC_011034
TCONS_00021539 mRNA upstream 178103 46518760 ~ 46524842 (-) False XLOC_011034
TCONS_00021542 mRNA upstream 189587 46530244 ~ 46567136 (-) False XLOC_011035
TCONS_00021543 mRNA upstream 213323 46553980 ~ 46558521 (-) False XLOC_011036
TCONS_00021532 other downstream 123634 46216808 ~ 46216909 (-) True XLOC_011030
TCONS_00021521 other downstream 1094801 45242381 ~ 45245742 (-) True XLOC_011019
TCONS_00021515 other downstream 1147391 45186673 ~ 45193152 (-) True XLOC_011016
TCONS_00021514 other downstream 1165983 45174446 ~ 45174560 (-) True XLOC_011015
TCONS_00021511 other downstream 1196171 45140858 ~ 45144372 (-) True XLOC_011012
TCONS_00021580 other upstream 1602486 47943143 ~ 47943257 (-) True XLOC_011054
TCONS_00021592 other upstream 3654821 49995478 ~ 49995594 (-) True XLOC_011068
TCONS_00021599 other upstream 4298013 50638670 ~ 50638786 (-) True XLOC_011073
TCONS_00021603 other upstream 4594533 50935190 ~ 50935306 (-) True XLOC_011077
TCONS_00021604 other upstream 4620589 50961246 ~ 50961362 (-) True XLOC_011078