Gene
RNA
| Item | Value |
|---|---|
| RNA id | TCONS_00021538 |
| length | 935 |
| RNA type | mRNA |
| GC content | 0.45 |
| exon number | 7 |
| gene id | XLOC_011034 |
| representative | False |
| Item | Value |
|---|---|
| chromosome id | NC_007127.7 |
| NCBI id | CM002900.2 |
| chromosome length | 55266484 |
| location | 46518114 ~ 46525155 (-) |
| genome version | GRCz11_2017_zebrafish_Genome |
| species | zebrafish (Danio rerio) |
| id | name | namespace |
|---|---|---|
| GO:0016020 | membrane | cellular_component |
| GO:0016021 | integral component of membrane | cellular_component |
| id | description |
|---|---|
| ZDB-GENE-080829-11 | Predicted to be located in membrane. Predicted to be integral component of membrane. Orthologous to human TMEM176B (transmembrane protein 176B). |
| ensembl_id | ENSDART00000163180 |
| RNA id | RNA type | direction | distance | location | representative | gene id |
|---|---|---|---|---|---|---|
| TCONS_00022263 | lncRNA | downstream | 58820 | 46434901 ~ 46459850 (-) | True | XLOC_011033 |
| TCONS_00022262 | lncRNA | downstream | 58949 | 46396002 ~ 46459721 (-) | False | XLOC_011033 |
| TCONS_00022261 | lncRNA | downstream | 69907 | 46396002 ~ 46448763 (-) | False | XLOC_011033 |
| TCONS_00022260 | lncRNA | downstream | 87520 | 46396002 ~ 46431150 (-) | False | XLOC_011033 |
| TCONS_00022265 | lncRNA | upstream | 96048 | 46621203 ~ 46622443 (-) | True | XLOC_011041 |
| TCONS_00021556 | lncRNA | upstream | 114981 | 46640136 ~ 46645396 (-) | True | XLOC_011042 |
| TCONS_00021836 | lncRNA | upstream | 271257 | 46796412 ~ 46798742 (-) | True | XLOC_011045 |
| TCONS_00022266 | lncRNA | upstream | 281082 | 46806237 ~ 46810212 (-) | False | XLOC_011046 |
| TCONS_00021837 | lncRNA | upstream | 281102 | 46806257 ~ 46810172 (-) | True | XLOC_011046 |
| TCONS_00021529 | mRNA | downstream | 600987 | 45912647 ~ 45917683 (-) | False | XLOC_011026 |
| TCONS_00021530 | mRNA | downstream | 601348 | 45914480 ~ 45917322 (-) | True | XLOC_011026 |
| TCONS_00021528 | mRNA | downstream | 608620 | 45904153 ~ 45910050 (-) | True | XLOC_011025 |
| TCONS_00021526 | mRNA | downstream | 663788 | 45796602 ~ 45854882 (-) | False | XLOC_011024 |
| TCONS_00021527 | mRNA | downstream | 663788 | 45797026 ~ 45854882 (-) | True | XLOC_011024 |
| TCONS_00021542 | mRNA | upstream | 5089 | 46530244 ~ 46567136 (-) | False | XLOC_011035 |
| TCONS_00021543 | mRNA | upstream | 28825 | 46553980 ~ 46558521 (-) | False | XLOC_011036 |
| TCONS_00021544 | mRNA | upstream | 30648 | 46555803 ~ 46558708 (-) | True | XLOC_011036 |
| TCONS_00021545 | mRNA | upstream | 37529 | 46562684 ~ 46567344 (-) | True | XLOC_011035 |
| TCONS_00021546 | mRNA | upstream | 42253 | 46567408 ~ 46573211 (-) | False | XLOC_011037 |
| TCONS_00021533 | other | downstream | 178013 | 46340543 ~ 46340657 (-) | True | XLOC_011031 |
| TCONS_00021532 | other | downstream | 301761 | 46216808 ~ 46216909 (-) | True | XLOC_011030 |
| TCONS_00021521 | other | downstream | 1272928 | 45242381 ~ 45245742 (-) | True | XLOC_011019 |
| TCONS_00021515 | other | downstream | 1325518 | 45186673 ~ 45193152 (-) | True | XLOC_011016 |
| TCONS_00021514 | other | downstream | 1344110 | 45174446 ~ 45174560 (-) | True | XLOC_011015 |
| TCONS_00021580 | other | upstream | 1417988 | 47943143 ~ 47943257 (-) | True | XLOC_011054 |
| TCONS_00021592 | other | upstream | 3470323 | 49995478 ~ 49995594 (-) | True | XLOC_011068 |
| TCONS_00021599 | other | upstream | 4113515 | 50638670 ~ 50638786 (-) | True | XLOC_011073 |
| TCONS_00021603 | other | upstream | 4410035 | 50935190 ~ 50935306 (-) | True | XLOC_011077 |
| TCONS_00021604 | other | upstream | 4436091 | 50961246 ~ 50961362 (-) | True | XLOC_011078 |
